Evidence map›Paper›PMID 40253327›Full record

ArticleRespiratory research2025

Proteogenomic verifies targets underlying erythromycin alleviate neutrophil extracellular traps-induced inflammation.

Nan Ma, Xiao Na Liang, Quan Fang Chen, Mei Hua Li, Guang Sheng Pei, Xiao Fei Yi, Li Yan Guo, Fu Gang Chen, Zhi Yi He

Abstract read
In one paragraph

Article in Respiratory research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Review
  3. COPD-Lung Cancer Comorbidity: Mechanistic Insights and Precision Oncology Implications.International journal of chronic obstructive pulmonary disease · 2026
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Nan Ma *Department of Respiratory Medicine, First Affiliated Hospital of Guangxi Medical University, Nanning, 530021, Guangxi, China.
Xiao Na Liang *Department of Respiratory Medicine, First Affiliated Hospital of Guangxi Medical University, Nanning, 530021, Guangxi, China.
Quan Fang ChenDepartment of Respiratory Medicine, First Affiliated Hospital of Guangxi Medical University, Nanning, 530021, Guangxi, China.
Mei Hua LiDepartment of Respiratory Medicine, First Affiliated Hospital of Guangxi Medical University, Nanning, 530021, Guangxi, China.
Guang Sheng PeiDepartment of Respiratory Medicine, First Affiliated Hospital of Guangxi Medical University, Nanning, 530021, Guangxi, China.
Xiao Fei YiDepartment of Respiratory Medicine, First Affiliated Hospital of Guangxi Medical University, Nanning, 530021, Guangxi, China.
Li Yan GuoDepartment of Respiratory Medicine, First Affiliated Hospital of Guangxi Medical University, Nanning, 530021, Guangxi, China.
Fu Gang ChenDepartment of Respiratory Medicine, First Affiliated Hospital of Guangxi Medical University, Nanning, 530021, Guangxi, China.
Zhi Yi HeDepartment of Respiratory Medicine, First Affiliated Hospital of Guangxi Medical University, Nanning, 530021, Guangxi, China. zhiyi-river@163.com.

Funding

National Natural Science Foundation of China 82260012
6 · The paper itself

Abstract

backgroundNeutrophil Extracellular Traps (NETs) are closely related to the progression of inflammation in Chronic Obstructive Pulmonary Disease (COPD). Erythromycin (EM) has been shown to inhibit inflammation in COPD, but its molecular mechanisms is still unclear. The aim of our study is investigate the molecular mechanisms of EM's anti-inflammatory effects in NETs-induced inflammation.

methodsTranscriptomics and proteomics data were obtained from U937 cells treated with NETs and EM. Differentially expressed genes (DEGs) and differentially expressed proteins (DEPs) were identified using R software. Pathway enrichment analyses, were employed to identify inflammation-related pathways. Cytoscape were utilized to construct network of hub targets regulated by EM which related with oxidative stress and inflammation. Additionally, Cytoscape and STRING were used to construct protein-protein interaction (PPI) network of key targets regulated by EM. The expression levels of key targets were further confirmed through WB and PCR experiments.

resultsBoth transcriptomics and proteomics indicate that EM decrease NETs -induced AKT1 expression. Enrichment analysis of DEGs and DEPs reveal multiple common pathways involved in EM's regulation inflammation, including the PI3K/AKT pathway, response to oxidative stress, IKK/NF-κB signaling and PTEN signaling pathway. Nine key targets in PI3K/AKT-related inflammatory pathways regulated by EM and ten targets of EM-regulated oxidative stress were identified. WB and PCR results confirmed that EM reversing the NETs-induced inflammation by modulating the activity of these targets. Furthermore, clinical samples and vitro experiments confirm that EM alleviates NETs-induced glucocorticoid resistance via inhibiting PI3K/AKT, thereby repressing inflammation.

conclusionsOur study provides a comprehensive proteogenomic characterization of how EM alleviates NET-related inflammation, and identify PI3K/AKT play a critical role in the mechanism by which EM inhibits inflammation.

Indexed as

ErythromycinExtracellular TrapsInflammationNeutrophilsProteomicsHumansU937 CellsErythromycinErythromycinInflammationNETsPI3K/AKTProteogenomic

Identifiers

PMID40253327
PMCPMC12009532

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.