Evidence map›Paper›PMID 40251888›Full record

ArticleJournal of computational chemistry2025

Substrates (Acyl-CoA and Diacylglycerol) Entry and Products (CoA and Triacylglycerol) Egress Pathways in DGAT1.

Hwayoung Lee, Wonpil Im

Abstract read
In one paragraph

Article in Journal of computational chemistry, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Hwayoung LeeDepartment of Biological Sciences, Lehigh University, Bethlehem, Pennsylvania, USA.ORCID https://orcid.org/0000-0003-2332-1993
Wonpil ImDepartment of Biological Sciences, Lehigh University, Bethlehem, Pennsylvania, USA.ORCID https://orcid.org/0000-0001-5642-6041

Funding

Breakthrough Molecular Dynamics Research via an Anton2 SupercomputerR01GM116961 · NIGMS · CARNEGIE-MELLON UNIVERSITY · PI BLOOD, PHILIP D. · 2016 to 2023
$3.0M
National Science Foundation MCB-2111728NIGMS NIH HHS R01 GM116961NIH HHS R01GM116961
6 · The paper itself

Abstract

Diacylglycerol O-acyltransferase 1 (DGAT1) is an integral membrane protein that uses acyl-coenzyme A (acyl-CoA) and diacylglycerol (DAG) to catalyze the formation of triacylglycerides (TAGs). The acyl transfer reaction occurs between the activated carboxylate group of the fatty acid and the free hydroxyl group on the glycerol backbone of DAG. However, how the two substrates enter DGAT1's catalytic reaction chamber and interact with DGAT1 remains elusive. This study aims to explore the structural basis of DGAT1's substrate recognition by investigating each substrate's pathway to the reaction chamber. Using a human DGAT1 cryo-EM structure in complex with an oleoyl-CoA substrate, we designed two different all-atom molecular dynamics (MD) simulation systems: DGAT1

Indexed as

Acyl Coenzyme ADiacylglycerol O-AcyltransferaseDiglyceridesTriglyceridesHumansMolecular Dynamics SimulationSubstrate SpecificityAcyl Coenzyme ADGAT1 protein, humanDiacylglycerol O-AcyltransferaseDiglyceridesTriglyceridesacyl‐CoADGAT1diacylglyceroldiacylglycerol O‐acyltransferase 1MBOATtriacylglycerol

Identifiers

PMID40251888
PMCPMC12008735

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.