Evidence map›Paper›PMID 40250264›Full record

ArticleCancer genetics2025

Analytical validation of the Belay Vantage™ assay for evaluation of MGMT promoter methylation using enzymatically converted tumorDNA from cerebrospinal fluid.

Kala F Schilter, Qian Nie, Jennifer N Adams, Rakshitha Jagadish, Anthony Acevedo, Alexandra Larson, Samantha A Vo, Brett A Domagala, Kyle M Hernandez, Christopher Douville and 4 more

Abstract readValidation Study
In one paragraph

Article in Cancer genetics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  8. TLR9: A Double-Dealing Toll-Like Receptor.ImmunoTargets and therapy · 2025
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Kala F SchilterBelay Diagnostics, Suite 530, 1375W. Fulton St, Chicago, IL 60607, USA.
Qian NieBelay Diagnostics, Suite 530, 1375W. Fulton St, Chicago, IL 60607, USA.
Jennifer N AdamsBelay Diagnostics, Suite 530, 1375W. Fulton St, Chicago, IL 60607, USA.
Rakshitha JagadishBelay Diagnostics, Suite 530, 1375W. Fulton St, Chicago, IL 60607, USA.
Anthony AcevedoBelay Diagnostics, Suite 530, 1375W. Fulton St, Chicago, IL 60607, USA.
Alexandra LarsonBelay Diagnostics, Suite 530, 1375W. Fulton St, Chicago, IL 60607, USA.
Samantha A VoBelay Diagnostics, Suite 530, 1375W. Fulton St, Chicago, IL 60607, USA.
Brett A DomagalaBelay Diagnostics, Suite 530, 1375W. Fulton St, Chicago, IL 60607, USA.
Kyle M HernandezBelay Diagnostics, Suite 530, 1375W. Fulton St, Chicago, IL 60607, USA.
Christopher DouvilleBelay Diagnostics, Suite 530, 1375W. Fulton St, Chicago, IL 60607, USA.
Yuxuan WangBelay Diagnostics, Suite 530, 1375W. Fulton St, Chicago, IL 60607, USA.
Brian CoeBelay Diagnostics, Suite 530, 1375W. Fulton St, Chicago, IL 60607, USA.
Chetan BettegowdaBelay Diagnostics, Suite 530, 1375W. Fulton St, Chicago, IL 60607, USA.
Honey V ReddiBelay Diagnostics, Suite 530, 1375W. Fulton St, Chicago, IL 60607, USA. Electronic address: hreddi@belaydiagnostics.com.

Funding

Multi-omic CSF Assay for the Diagnosis of Brain CancersR42NS135834 · NINDS · BELAY DIAGNOSTICS, LLC · PI CHETAN BETTEGOWDA, Brian Coe · 2024 to 2026
$2.1M
NINDS NIH HHS R42 NS135834
6 · The paper itself

Abstract

MGMT promoter methylation status (hypermethylation) is one of the strongest prognostic and predictive biomarkers in glioblastoma (GBM) and is associated with a more favorable response to alkylating chemotherapies such as Temozolomide (TMZ). Additionally, it is associated with pseudo progression in GBM, a phenomenon in which early radiographic changes after treatment are indicative of possible tumor recurrence though on histological examination it is consistent with treatment effect. Current methods for evaluation of MGMT promoter methylation status are limited to tumor tissue, requiring invasive biopsy or surgery, prompting the need for a liquid biopsy-based assay to expand and manage therapeutic interventions. The Belay Vantage™ assay evaluates MGMT promoter methylation status in cerebrospinal fluid (CSF) of individuals with known or suspected central nervous system tumors using low input DNA. The assay uses quantitative polymerase chain reaction (qPCR) on DNA extracted from CSF after enzymatic conversion and has an analytical sensitivity of 95.5 % and specificity of 100 %.

Indexed as

Biomarkers, TumorBrain NeoplasmsDNA MethylationDNA Modification MethylasesDNA, NeoplasmDNA Repair EnzymesGlioblastomaPromoter Regions, GeneticTumor Suppressor ProteinsAdultFemaleHumansMaleMiddle AgedTemozolomideBiomarkers, TumorDNA Modification MethylasesDNA, NeoplasmDNA Repair EnzymesMGMT protein, humanTemozolomideTumor Suppressor ProteinsCerebrospinal fluidEnzymatic conversionLiquid biopsyMGMT methylationQuantitative PCR

Identifiers

PMID40250264
PMCPMC13265240

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.