Evidence map›Paper›PMID 40249492›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2025

Closed-Loop Optogenetic Stimulation of the Olfactory Circuit at Different Phases of Theta Oscillations of the Local Field Potential.

Joseph A Villanueva, Diego Restrepo, Daniel Ramirez-Gordillo

Abstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Joseph A VillanuevaDepartment of Neurology, University of Colorado Anschutz Medical Campus, Aurora, CO, USA.
Diego RestrepoNeuroscience Program, University of Colorado Anschutz Medical Campus, Aurora, CO, USA.
Daniel Ramirez-GordilloNeurosurgery Department, University of Colorado Anschutz Medical Campus, Aurora, CO, USA. daniel.ramirez-gordillo@cuanschutz.edu.

Funding

Sensory and learning improvements elicited by oscillatory coupling through local and long-range interneuronsK01NS127850 · NINDS · UNIVERSITY OF COLORADO DENVER · PI Daniel Ramirez-Gordillo · 2022 to 2026
$1.0M
NINDS NIH HHS K01 NS127850
6 · The paper itself

Abstract

The development of optogenetics introduced a method for dynamic control of neuronal function. This advancement has catalyzed substantial progress in the field of neuroscience by providing a method to precisely activate or inhibit cells with light, allowing researchers to probe the role of neural circuits in behavior and interactions between circuits in different regions of the brain. We have developed an inexpensive device to deliver light for closed-loop optogenetic stimulation of neurons at different phases of the theta local field potential (LFP). LFP data is acquired with an INTAN RHD2000 recording system. An analog LFP output from the INTAN board is filtered in the theta frequency and an Arduino UNO detects troughs and peaks and sends a TTL pulse to a laser which precisely controls light delivery at the desired theta phases. We use this system to deliver light stimulation at the peak or trough of theta, but users can edit the code for delivery at other phases. We have made the code open source, and it can be downloaded from https://github.com/restrepd/drgClosedLoop .

Indexed as

Olfactory PathwaysOptogeneticsTheta RhythmAnimalsMiceNeuronsClosed-loop optogeneticsGo/no-go taskINTANLFPPeakTheta oscillationsTrough

Identifiers

PMID40249492
PMCPMC12970981

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.