Evidence map›Paper›PMID 40249109›Full record

ArticleCardiovascular research2025

Integrated proteomics identifies troponin I isoform switch as a regulator of a sarcomere-metabolism axis during cardiac regeneration.

Timothy J Aballo, Jiyoung Bae, Wyatt G Paltzer, Emily A Chapman, Andrew J Perciaccante, Melissa R Pergande, Rebecca J Salamon, Dakota J Nuttall, Morgan W Mann, Ying Ge and 1 more

Abstract read
In one paragraph

Article in Cardiovascular research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Signaling pathways regulating cardiac regeneration.Cell regeneration (London, England) · 2026
    Review
  2. Article
  3. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors.

Timothy J AballoDepartment of Cell and Regenerative Biology, School of Medicine and Public Health, University of Wisconsin-Madison, Madison, WI 53705, USA.
Jiyoung BaeDepartment of Nutritional Sciences, Oklahoma State University, Stillwater, OK 74078, USA.
Wyatt G PaltzerDepartment of Cell and Regenerative Biology, School of Medicine and Public Health, University of Wisconsin-Madison, Madison, WI 53705, USA.
Emily A ChapmanDepartment of Chemistry, University of Wisconsin-Madison, Madison, WI 53705, USA.
Andrew J PerciaccanteDepartment of Chemistry, University of Wisconsin-Madison, Madison, WI 53705, USA.
Melissa R PergandeDepartment of Cell and Regenerative Biology, School of Medicine and Public Health, University of Wisconsin-Madison, Madison, WI 53705, USA.
Rebecca J SalamonDepartment of Cell and Regenerative Biology, School of Medicine and Public Health, University of Wisconsin-Madison, Madison, WI 53705, USA.
Dakota J NuttallDepartment of Cell and Regenerative Biology, School of Medicine and Public Health, University of Wisconsin-Madison, Madison, WI 53705, USA.
Morgan W MannDepartment of Medicine, University of Wisconsin-Madison, Madison, WI 53705, USA.
Ying GeDepartment of Cell and Regenerative Biology, School of Medicine and Public Health, University of Wisconsin-Madison, Madison, WI 53705, USA.
Ahmed I MahmoudDepartment of Cell and Regenerative Biology, School of Medicine and Public Health, University of Wisconsin-Madison, Madison, WI 53705, USA.ORCID 0000-0003-1528-7393

Funding

Training Program in Translational Cardiovascular Science (TPTCS)T32HL007936 · NHLBI · UNIVERSITY OF WISCONSIN-MADISON · PI Lee Lochbaum Eckhardt, Gail A Robertson · 2001 to 2026
$11.6M
Training Program In Molecular AND Cellular PharmacologyT32GM008688 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI AUDHYA, ANJON · 1998 to 2020
$6.0M
Top Down Proteomics Of Myofilaments In Heart FailureR01HL096971 · NHLBI · UNIVERSITY OF WISCONSIN-MADISON · PI GE, YING · 2011 to 2021
$3.3M
Enabling Top-Down Proteomics through Materials Chemistry and NanotechnologyR01GM117058 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI GE, YING, JIN, SONG · 2015 to 2023
$2.7M
Metabolic Reprogramming of the Adult Heart to a Regenerative StateR01HL166256 · NHLBI · UNIVERSITY OF WISCONSIN-MADISON · PI Ahmed I Mahmoud · 2023 to 2026
$1.8M
Targeting Metabolism To Stimulate Adult Heart RegenerationR56HL155617 · NHLBI · UNIVERSITY OF WISCONSIN-MADISON · PI MAHMOUD, AHMED I · 2021 to 2021
$393k
DOD GM125085DOD HL109810DOD W81XWH2210094NHLBI NIH HHS HL155617NHLBI NIH HHS HL166256NHLBI NIH HHS R01 HL096971NHLBI NIH HHS R01 HL166256NHLBI NIH HHS R56 HL155617NHLBI NIH HHS T32 HL007936NIGMS NIH HHS R01 GM117058NIGMS NIH HHS T32 GM008688NIHNRSA F31HL167328ODCDC CDC HHS S10 OD018475
6 · The paper itself

Abstract

aimsAdult mammalian cardiomyocytes (CMs) have limited regenerative potential, and after myocardial infarction (MI), injured cardiac tissue is replaced with fibrotic scar. In contrast, the neonatal mouse heart possesses a regenerative capacity governed by CM proliferation; however, a metabolic switch from glycolysis to fatty acid oxidation during post-natal development results in loss of this regenerative capacity. Interestingly, a sarcomere isoform switch also takes place during post-natal development where slow skeletal troponin I (ssTnI) is replaced with cardiac troponin I (cTnI). It remains unclear whether there is an interplay between sarcomere isoform switching, cardiac metabolism, and regeneration. METHODS AND

resultsIn this study, we employ proteomics, metabolomics, and lipidomics, transgenic mice, MI models, and histological analysis to delineate the molecular and sarcomeric transitions that occur during cardiac maturation and regeneration. First, we utilize integrated quantitative bottom-up and top-down proteomics to comprehensively define the proteomic and sarcomeric landscape during post-natal heart maturation. By employing a CM-specific ssTnI transgenic mouse model, we discovered that ssTnI overexpression increased CM proliferation and the cardiac regenerative capacity of the post-natal heart following MI compared to control mice by histological analysis. Our global proteomic analysis of ssTnI transgenic mice following MI reveals that ssTnI overexpression induces a significant shift in the cardiac proteomic landscape. Additionally, our lipidomic analysis demonstrated a significant up-regulation of lipid species in the transgenic mice. This proteomic shift is characterized by an up-regulation of key proteins involved in glycolytic metabolism.

conclusionCollectively, our data suggest that the post-natal TnI isoform switch may play a role in the metabolic shift from glycolysis to fatty acid oxidation during post-natal maturation. This underscores the significance of a sarcomere-metabolism axis during CM proliferation and heart regeneration.

Indexed as

Energy MetabolismMyocardial InfarctionMyocytes, CardiacProteomicsRegenerationSarcomeresTroponin IAnimalsCell ProliferationDisease Models, AnimalLipidomicsMice, Inbred C57BLMice, TransgenicProtein IsoformsSignal TransductionProtein IsoformsTroponin ICardiomyocyte proliferationHeart regenerationLipidomicsMass spectrometryMetabolismMetabolomicsProteomics

Identifiers

PMID40249109
PMCPMC12310282

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.