Evidence map›Paper›PMID 40240711›Full record

ArticleArchives of virology2025

Complete genome sequence of a new polerovirus identified in Ageratum conyzoides.

Fumei Zhao, Yilin Zhang, Jie Li, Yuting Tian, Yongjiang Wang, Desheng Zhang, Qi Qiao, Zhenchen Zhang

Abstract read
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In one paragraph

Article in Archives of virology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Fumei ZhaoInstitute of Plant Protection, Henan Academy of Agricultural Sciences, Zhengzhou, 450002, China.
Yilin ZhangInstitute of Plant Protection, Henan Academy of Agricultural Sciences, Zhengzhou, 450002, China.
Jie LiInstitute of Plant Protection, Henan Academy of Agricultural Sciences, Zhengzhou, 450002, China.
Yuting TianInstitute of Plant Protection, Henan Academy of Agricultural Sciences, Zhengzhou, 450002, China.
Yongjiang WangInstitute of Plant Protection, Henan Academy of Agricultural Sciences, Zhengzhou, 450002, China.
Desheng ZhangInstitute of Plant Protection, Henan Academy of Agricultural Sciences, Zhengzhou, 450002, China.
Qi QiaoInstitute of Plant Protection, Henan Academy of Agricultural Sciences, Zhengzhou, 450002, China.
Zhenchen ZhangInstitute of Plant Protection, Henan Academy of Agricultural Sciences, Zhengzhou, 450002, China. zhangzhenchen@126.com.ORCID http://orcid.org/0000-0001-9786-6545

Funding

China Agriculture Research System CARS-10-Sweetpotatothe Joint fund for Scientific and technological research and development of Henan 232301420120
6 · The paper itself

Abstract

A new polerovirus, designated as "ageratum virus 3" (AgV3), was detected in an Ageratum conyzoides plant in China. The complete genome sequence of AgV3 was determined using high-throughput sequencing, rapid amplification of cDNA ends, and Sanger sequencing of RT-PCR fragments. The organization of its single-stranded RNA genome of 5,652 nucleotides is typical of members of the genus Polerovirus in the family Solemoviridae, with seven putative open reading frames (ORFs 0-5 and ORF3a). The AgV3 genome shares the highest nucleotide sequence identity (65.7%) with that of cucurbit aphid-borne yellows virus (genus Polerovirus). Sequence comparisons of the gene products of AgV3 to those of its closest relatives revealed that all of them, with the exception of the ORF3a protein, had amino acid sequence identity values that were below the threshold for demarcation for species within the genus Polerovirus established by the International Committee of Taxonomy of Viruses (ICTV), suggesting that AgV3 is a new member of the genus Polerovirus. Phylogenetic analysis based on P1-P2 and coat protein amino acid sequences also indicated that AgV3 is a novel polerovirus.

Indexed as

AgeratumGenome, ViralLuteoviridaePlant DiseasesBase SequenceChinaHigh-Throughput Nucleotide SequencingOpen Reading FramesPhylogenyRNA, ViralViral ProteinsRNA, ViralViral Proteins

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.