Evidence map›Paper›PMID 40240520›Full record

ArticleCell death and differentiation2025

DUBA sustains the stability of NOD2 and RIPK2 to enhance innate immune responses.

Bincheng Zhou, Maojin Yin, Xian Su, Suhui Sheng, Xue Du, Jiangyun Shen, Kangmin Chen, Deqi Wang, Zhenhu Zhu, Yanqi Xu and 5 more

Abstract read
In one paragraph

Article in Cell death and differentiation, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Review
  3. Regulation of Neuroinflammation by Microglial DUBA-IRAK1-IKKβ Signaling Loop.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Bincheng ZhouSchool of Pharmaceutical Sciences, Wenzhou Medical University, Wenzhou, 325035, China.
Maojin YinSchool of Pharmaceutical Sciences, Wenzhou Medical University, Wenzhou, 325035, China.
Xian SuOujiang Laboratory (Zhejiang Lab for Regenerative Medicine, Vision and Brain Health), Wenzhou, 325000, China.
Suhui ShengSchool of Pharmaceutical Sciences, Wenzhou Medical University, Wenzhou, 325035, China.
Xue DuOujiang Laboratory (Zhejiang Lab for Regenerative Medicine, Vision and Brain Health), Wenzhou, 325000, China.
Jiangyun ShenOujiang Laboratory (Zhejiang Lab for Regenerative Medicine, Vision and Brain Health), Wenzhou, 325000, China.
Kangmin ChenOujiang Laboratory (Zhejiang Lab for Regenerative Medicine, Vision and Brain Health), Wenzhou, 325000, China.
Deqi WangThe First School of Medicine and School of Information and Engineering, Wenzhou Medical University, Wenzhou, 325035, China.
Zhenhu ZhuOujiang Laboratory (Zhejiang Lab for Regenerative Medicine, Vision and Brain Health), Wenzhou, 325000, China.
Yanqi XuSchool of Pharmaceutical Sciences, Wenzhou Medical University, Wenzhou, 325035, China.
Zhongding LiOujiang Laboratory (Zhejiang Lab for Regenerative Medicine, Vision and Brain Health), Wenzhou, 325000, China.
Jianmin LiDepartment of Pathology, The First Affiliated Hospital of Wenzhou Medical University, Wenzhou, 325000, China.
Yuhua LiCollege of Life Sciences, Northeast Forestry University, Harbin, 150040, China.
Jing RuanDepartment of Pathology, The First Affiliated Hospital of Wenzhou Medical University, Wenzhou, 325000, China. ruanjing850617@163.com.ORCID 0009-0000-3646-2918
Xu WangSchool of Pharmaceutical Sciences, Wenzhou Medical University, Wenzhou, 325035, China. sunrim@163.com.ORCID 0000-0001-8428-9339

Funding

National Natural Science Foundation of China (National Science Foundation of China) 81900496
6 · The paper itself

Abstract

Nucleotide-binding oligomerization domain containing 2 (NOD2) detects conserved fragments of bacterial peptidoglycan in the cytosol and induces innate immune responses. Here, we found that the NOD2 signaling pathway was critically regulated by the deubiquitinating enzyme DUBA. DUBA-deficient macrophages were defective in NOD2 signaling and produced significantly lower amounts of cytokines and chemokines in response to muramyl dipeptide (MDP). DUBA potentiated NOD2-mediated signal transduction by maintaining the protein levels of NOD2 and receptor-interacting protein kinase 2 (RIPK2). Mechanistically, DUBA interacted with NOD2 and RIPK2 and removed K48-linked polyubiquitin chains from them through enzymatic activity, thereby inhibiting the proteasomal degradation of NOD2 and RIPK2. Macrophage-specific ablation of DUBA attenuated MDP-induced systematic inflammation and liver injury in mice. In addition, DUBA deficiency in macrophages rendered mice hypersensitive to DSS-induced colitis and eliminated the protective effect of MDP treatment in colitis. Thus, DUBA acts as an important regulator of NOD2-mediated signaling and innate immune responses.

Indexed as

Deubiquitinating EnzymesImmunity, InnateNod2 Signaling Adaptor ProteinReceptor-Interacting Protein Serine-Threonine Kinase 2Acetylmuramyl-Alanyl-IsoglutamineAnimalsColitisHumansMacrophagesMiceMice, Inbred C57BLMice, KnockoutSignal TransductionAcetylmuramyl-Alanyl-IsoglutamineDeubiquitinating EnzymesNod2 protein, mouseNod2 Signaling Adaptor ProteinReceptor-Interacting Protein Serine-Threonine Kinase 2Ripk2 protein, mouse

Identifiers

PMID40240520
PMCPMC12572244

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.