Evidence map›Paper›PMID 40240409›Full record

ArticleScientific data2025

Single-cell chromatin landscapes associated with the burnt skin healing process in rats.

Tao Wang, Bolin Zhu, Jianyu Lu, Xinya Guo, Ruikang Li, Yue Yuan, Junjie Chen, Xi Dai, Shuai Liu, Jiaxin Du and 5 more

Abstract readDataset
In one paragraph

Article in Scientific data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Tao Wang *College of Life Sciences, University of Chinese Academy of Sciences, Beijing, 100049, China.
Bolin Zhu *College of Life Sciences, University of Chinese Academy of Sciences, Beijing, 100049, China.
Jianyu Lu *Department of Burn Surgery, The First Affiliated Hospital of Naval Medical University, Shanghai, 200433, China.
Xinya GuoDepartment of Burn Surgery, The First Affiliated Hospital of Naval Medical University, Shanghai, 200433, China.
Ruikang LiBGI Research, Hangzhou, 310030, China.
Yue YuanBGI Research, Hangzhou, 310030, China.
Junjie ChenBGI Research, Hangzhou, 310030, China.
Xi DaiBGI Research, Hangzhou, 310030, China.
Shuai LiuBGI College & Henan Institute of Medical and Pharmaceutical Sciences, Zhengzhou University, Zhengzhou, 450000, China.
Jiaxin DuCollege of Life Sciences, University of Chinese Academy of Sciences, Beijing, 100049, China.
Xun XuCollege of Life Sciences, University of Chinese Academy of Sciences, Beijing, 100049, China.ORCID http://orcid.org/0000-0002-5338-5173
Huan LiuCollege of Life Sciences, University of Chinese Academy of Sciences, Beijing, 100049, China.ORCID http://orcid.org/0000-0003-3909-0931
Xiaoyu WeiBGI Research, Hangzhou, 310030, China. weixiaoyu@genomics.cn.
Runzhi HuangDepartment of Burn Surgery, The First Affiliated Hospital of Naval Medical University, Shanghai, 200433, China. runzhihuang2022@163.com.
Shizhao JiDepartment of Burn Surgery, The First Affiliated Hospital of Naval Medical University, Shanghai, 200433, China. shizhaoji2022@163.com.

Funding

National Natural Science Foundation of China (National Science Foundation of China) 81930057,81772076
6 · The paper itself

Abstract

Thermal injuries represent one of the most severe forms of trauma to the human body, with a high annual incidence of burn victims globally. Skin regeneration and wound healing following thermal injury constitute a complex process involving various cell types and cytokine interactions. By Single-cell ATAC sequencing (scATAC-seq), we elucidated the molecular mechanisms underlying the dermal regeneration and healing processes following thermal injury in a rat model. Tissue samples were harvested for sequencing at predetermined intervals (0 h, 12 h, 24 h, 3 d, 7 d, 11 d, 15 d, and 19 d post-injury), yielding 28,179 high-quality single cells. Our comprehensive analysis revealed 28 distinct cell populations throughout the regenerative process, encompassing various subsets of keratinocytes, fibroblasts, and immune cells, exhibiting temporal heterogeneity across samples. Furthermore, we investigated the chromatin accessibility landscape of individual cell types and identified enriched transcription factor binding motifs, corroborating the robustness and validity of our data. Our dataset provides a valuable resource for further elucidation of burnt skin regeneration and healing processes.

Indexed as

BurnsChromatinSkinWound HealingAnimalsFibroblastsKeratinocytesRatsRegenerationSingle-Cell AnalysisChromatin

Identifiers

PMID40240409
PMCPMC12003776

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.