Evidence map›Paper›PMID 40237501›Full record

ArticlemSystems2025

Resuscitation-promoting factor (Rpf) terminates dormancy among diverse soil bacteria.

Jay T Lennon, Brent K Lehmkuhl, Lingling Chen, Melissa Illingworth, Venus Kuo, Mario E Muscarella

Abstract read
In one paragraph

Article in mSystems, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Microbiology spectrum · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Jay T LennonDepartment of Biology, Indiana University, Bloomington, Indiana, USA.ORCID 0000-0003-3126-6111
Brent K LehmkuhlDepartment of Biology, Indiana University, Bloomington, Indiana, USA.
Lingling ChenDepartment of Molecular and Cellular Biochemistry, Indiana University, Bloomington, Indiana, USA.
Melissa IllingworthDepartment of Molecular and Cellular Biochemistry, Indiana University, Bloomington, Indiana, USA.
Venus KuoDepartment of Biology, Indiana University, Bloomington, Indiana, USA.
Mario E MuscarellaInstitute of Arctic Biology and Department of Biology and Wildlife, University of Alaska, Fairbanks, Alaska, USA.ORCID 0000-0001-6183-6037

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microorganisms often inhabit environments that are suboptimal for growth and reproduction. To survive when challenged by such conditions, individuals engage in dormancy, where they enter a metabolically inactive state. For this persistence strategy to confer an evolutionary advantage, microorganisms must be able to resuscitate and reproduce when conditions improve. Among bacteria in the phylum Actinomycetota, dormancy can be terminated by resuscitation-promoting factor (Rpf), an exoenzyme that hydrolyzes glycosidic bonds in the peptidoglycan of cell walls. We characterized Rpf from IMPORTANCE: Dormancy is a process whereby individuals enter a reversible state of reduced metabolic activity. In fluctuating environments, dormancy protects individuals from unfavorable conditions, enhancing fitness and buffering populations against extinction. However, waking up from dormancy is a critical yet risky decision. Some bacteria resuscitate stochastically, while others rely on environmental cues or signals from neighboring cells to transition back to active growth. Resuscitation-promoting factor (Rpf) is an exoenzyme that cleaves bonds in the peptidoglycan of bacterial cell walls, facilitating dormancy termination and enabling regrowth. Although this family of proteins has been well characterized in model organisms and clinically relevant strains, our study characterizes Rpf from a soil bacterium and examines its effects on resuscitation across a diverse collection of bacteria, linking it to functional traits that may influence dormancy dynamics in both natural and managed ecosystems.

Indexed as

Bacterial ProteinsSoil MicrobiologyCytokinesPhylogenyBacterial ProteinsCytokinesresuscitation-promoting factor, bacteriabiodiversitypersistenceseed banksignalingtraits

Identifiers

PMID40237501
PMCPMC12090717

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.