Evidence map›Paper›PMID 40237397›Full record

ArticleTransfusion2025

Detecting red blood cell protein antigens by tandem mass spectrometry.

Sandip Chavan, Ramanath Majumdar, Neha Joshi, Benjamin Madden, Jane Peterson, Craig T Tauscher, Jennifer E Schieber, Andrew P Norgan, Eapen K Jacob, Akhilesh Pandey and 1 more

Abstract read
In one paragraph

Article in Transfusion, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Sandip ChavanDepartment of Laboratory Medicine & Pathology, Mayo Clinic, Rochester, Minnesota, USA.
Ramanath MajumdarDepartment of Laboratory Medicine & Pathology, Mayo Clinic, Rochester, Minnesota, USA.
Neha JoshiDepartment of Laboratory Medicine & Pathology, Mayo Clinic, Rochester, Minnesota, USA.ORCID https://orcid.org/0000-0001-9232-1589
Benjamin MaddenProteomics Core, Mayo Clinic, Rochester, Minnesota, USA.
Jane PetersonProteomics Core, Mayo Clinic, Rochester, Minnesota, USA.
Craig T TauscherDepartment of Laboratory Medicine & Pathology, Mayo Clinic, Rochester, Minnesota, USA.ORCID https://orcid.org/0000-0003-2692-6613
Jennifer E SchieberDepartment of Laboratory Medicine & Pathology, Mayo Clinic, Rochester, Minnesota, USA.
Andrew P NorganDepartment of Laboratory Medicine & Pathology, Mayo Clinic, Rochester, Minnesota, USA.
Eapen K JacobDepartment of Laboratory Medicine & Pathology, Mayo Clinic, Rochester, Minnesota, USA.
Akhilesh PandeyDepartment of Laboratory Medicine & Pathology, Mayo Clinic, Rochester, Minnesota, USA.
Justin E JuskewitchDepartment of Laboratory Medicine & Pathology, Mayo Clinic, Rochester, Minnesota, USA.ORCID https://orcid.org/0000-0002-7868-2852

Funding

Women's Cancer ProgramP30CA015083 · NCI · MAYO CLINIC ROCHESTER · PI AKHILESH PANDEY · 1985 to 2026
$151.3M
Mayo Clinic Center for Clinical ProteomicsU01CA271410 · NCI · MAYO CLINIC ROCHESTER · PI Rafael Fonseca, AKHILESH PANDEY · 2022 to 2026
$5.3M
NCI NIH HHS P30 CA015083NCI NIH HHS U01 CA271410NIH HHS P30CA15083NIH HHS U01CA271410
6 · The paper itself

Abstract

backgroundTandem mass spectrometry (MS/MS) has become a common clinical laboratory testing modality has demonstrated success in distinguishing between small protein variations in transthyretin amyloidosis. Since many common clinically significant RBC antigens are also small protein variations, this study aimed to determine if MS/MS could correctly detect common RBC antigens within the Rh, Kell, Duffy, MNS, Kidd, Diego, and Lutheran blood group systems. STUDY DESIGN AND

methodsResidual samples from serotyped/genotyped blood donors at a hospital-based blood donation center from February to August 2021 were analyzed. RBC membrane protein preparations underwent protease digestion prior to MS/MS analysis for RhD, RhCE, Kell, atypical chemokine receptor 1 (Duffy), glycophorin A (MNS), glycophorin B (MNS), urea transporter 1 (Kidd), band 3 anion transport protein (Diego), and basal cell adhesion molecule (Lutheran). Untargeted liquid chromatography (LC)-MS/MS detected protein-specific peptides, while targeted LC-selected reaction monitoring (LC-SRM) detected RBC antigen-containing peptides.

resultsThrough the use of multiple proteases, untargeted LC-MS/MS detected protein-specific peptides in all but glycophorin B, with band 3 anion transport protein, basal cell adhesion molecule, Kell, and glycophorin A having the greatest protein sequence coverage. Targeted LC-SRM detected antigen-specific peptides for C DISCUSSION: MS/MS can successfully detect peptides from several blood group systems but only detected a subset of their common RBC antigens. Further sample enrichment and MS/MS detection improvements will need to occur before MS/MS could be considered a clinical RBC phenotyping modality.

Indexed as

Blood Group AntigensErythrocytesTandem Mass SpectrometryBlood DonorsChromatography, LiquidHumansBlood Group Antigensimmunohematology (RBC serology, blood groups)RBC transfusiontransfusion service operations

Identifiers

PMID40237397
PMCPMC12088880

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.