Evidence map›Paper›PMID 40234762›Full record

ArticleBMC genomics2025

A conserved terpene cyclase gene in Sanghuangporus for abscisic acid-related sesquiterpenoid biosynthesis.

Yoonhee Cho, Chang Wan Seo, Hyeonjae Cho, Yeongwoon Jin, Abel Severin Lupala, Sang Hee Shim, Young Woon Lim

Abstract read
In one paragraph

Article in BMC genomics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Genome Assembly and Genomic Characterization ofJournal of fungi (Basel, Switzerland) · 2026
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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Yoonhee Cho *School of Biological Sciences and Institute of Biodiversity, Seoul National University, Seoul, 08826, Republic of Korea.
Chang Wan Seo *School of Biological Sciences and Institute of Biodiversity, Seoul National University, Seoul, 08826, Republic of Korea.
Hyeonjae Cho *College of Pharmacy, Natural Products Research Institute, Seoul National University, Seoul, 08826, Republic of Korea.
Yeongwoon JinCollege of Pharmacy, Natural Products Research Institute, Seoul National University, Seoul, 08826, Republic of Korea.
Abel Severin LupalaSchool of Biological Sciences and Institute of Biodiversity, Seoul National University, Seoul, 08826, Republic of Korea.
Sang Hee ShimCollege of Pharmacy, Natural Products Research Institute, Seoul National University, Seoul, 08826, Republic of Korea. sanghee_shim@snu.ac.kr.
Young Woon LimSchool of Biological Sciences and Institute of Biodiversity, Seoul National University, Seoul, 08826, Republic of Korea. ywlim@snu.ac.kr.

Funding

National Research Foundation of Korea RS-2023-NR076619National Research Foundation of Korea RS-2024-00352229
6 · The paper itself

Abstract

backgroundThe medicinal mushroom Sanghuangporus is renowned in East Asia for its potent therapeutic properties, attributed in part to its bioactive sesquiterpenoids. However, despite their recognized medicinal potential, the biosynthetic pathways and specific enzymes responsible for sesquiterpenoid production in Sanghuangporus remain unexplored, limiting opportunities to optimize their medicinal applications.

resultsSesquiterpenoids from four Sanghuangporus species were extracted through targeted isolation using mass spectrometry (MS)-based metabolomics, resulting in the discovery of six known abscisic acid-related compounds and one new compound, whose structure was determined through spectroscopic and computational analysis. We employed a natural product genome mining approach to identify a putative biosynthetic gene cluster (BGC) containing a sesquiterpene synthase gene, ancA, associated with the detected compounds. Biosynthetic pathways for these compounds were proposed based on an integrative approach combining BGC analysis and MS2 fragment-based dereplication. Further analyses revealed that the gene content and synteny of the ancA BGC are relatively well-conserved across Sanghuangporus species but less so outside the genus.

conclusionsA sesquiterpene synthase gene, its associated BGC, and the biosynthetic pathway for a group of detected abscisic acid-related sesquiterpenoids in Sanghuangporus were predicted through genomic and metabolic data analyses. This study addresses a critical gap in understanding the genetic basis of sesquiterpenoid production in Sanghuangporus and offers insights for future research on engineering metabolic pathways to enhance sesquiterpenoid production for medicinal use.

Indexed as

Abscisic AcidAgaricalesAlkyl and Aryl TransferasesSesquiterpenesBiosynthetic PathwaysMultigene FamilyPhylogenyAbscisic AcidAlkyl and Aryl TransferasesSesquiterpenesterpene synthaseAbscisic acidAncAGenome miningInonotus sanghuangPhellinus linteusTerpene synthase

Identifiers

PMID40234762
PMCPMC12001456

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.