Evidence map›Paper›PMID 40234449›Full record

ArticleNature communications2025

Disrupting bile acid metabolism by suppressing Fxr causes hepatocellular carcinoma induced by YAP activation.

Yuchen Liu, Juanjuan Zhu, Yu Jin, Zhonghe Sun, Xiaolin Wu, Huiping Zhou, Yingzi Yang

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
  4. Review
  5. Review
  6. FXR's double life in bile ducts.Nature metabolism · 2026
    Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Review
  17. FXR-mediated antigen-specific CD8Journal for immunotherapy of cancer · 2025
    Article
  18. Current oncology (Toronto, Ont.) · 2025
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Yuchen LiuDepartment of Developmental Biology, Harvard School of Dental Medicine, Boston, MA, USA.ORCID http://orcid.org/0000-0001-8922-9976
Juanjuan ZhuDepartment of Developmental Biology, Harvard School of Dental Medicine, Boston, MA, USA.
Yu JinDepartment of Developmental Biology, Harvard School of Dental Medicine, Boston, MA, USA.
Zhonghe SunCancer Research Technology Program, Frederick National Laboratory for Cancer, Frederick, MD, USA.
Xiaolin WuCancer Research Technology Program, Frederick National Laboratory for Cancer, Frederick, MD, USA.ORCID http://orcid.org/0000-0002-6432-1300
Huiping ZhouDepartment of Microbiology & Immunology, School of Medicine, Virginia Commonwealth University, Richmond, VA, USA.ORCID http://orcid.org/0000-0002-0050-372X
Yingzi YangDepartment of Developmental Biology, Harvard School of Dental Medicine, Boston, MA, USA. yingzi_yang@hsdm.harvard.edu.ORCID http://orcid.org/0000-0003-3933-887X

Funding

Molecular Mechanism of Wnt/Planar Cell Polarity SignalingR01AR070877 · NIAMS · HARVARD MEDICAL SCHOOL · PI YANG, YINGZI · 2017 to 2022
$3.0M
Circular RNAs in Cholestatic Liver DiseasesR01DK139587 · NIDDK · VIRGINIA COMMONWEALTH UNIVERSITY · PI HUIPING ZHOU · 2024 to 2026
$2.2M
Sphingolipids in alcoholic liver diseaseR01AA030180 · NIAAA · VIRGINIA COMMONWEALTH UNIVERSITY · PI PHILLIP B HYLEMON, HUIPING ZHOU · 2023 to 2026
$2.1M
Cellular and molecular mechanism of Hippo signaling in suppressing liver tumor formationR01CA222571 · NCI · HARVARD MEDICAL SCHOOL · PI YANG, YINGZI · 2018 to 2022
$1.9M
BLRD VA I01 BX005730BLRD VA IK6 BX004477BLRD VA IS1 BX004777NCI NIH HHS R01 CA222571NIAAA NIH HHS R01 AA030180NIAMS NIH HHS R01 AR070877NIDDK NIH HHS R01 DK139587U.S. Department of Health & Human Services | NIH | National Cancer Institute (NCI) R01CA222571U.S. Department of Health & Human Services | NIH | National Institute of Arthritis and Musculoskeletal and Skin Diseases (NIAMS) R01AR070877
6 · The paper itself

Abstract

Disruption of bile acid (BA) metabolism causes various liver diseases including hepatocellular carcinoma (HCC). However, the underlying molecular mechanism remains elusive. Here, we report that BA metabolism is directly controlled by a repressor function of YAP, which induces cholestasis by altering BA levels and composition via inhibiting the transcription activity of Fxr, a key physiological BA sensor. Elevated BA levels further activate hepatic YAP, resulting in a feedforward cycle leading to HCC. Mechanistically, Teads are found to bind Fxr in a DNA-binding-independent manner and recruit YAP to epigenetically suppress Fxr. Promoting BA excretion, or alleviating YAP repressor function by pharmacologically activating Fxr and inhibiting HDAC1, or overexpressing an Fxr target gene Bsep to promote BA exportation, alleviate cholestasis and HCC caused by YAP activation. Our results identify YAP's transcriptional repressor role in BA metabolism as a key driver of HCC and suggest its potential as a therapeutic target.

Indexed as

Adaptor Proteins, Signal TransducingBile Acids and SaltsCarcinoma, HepatocellularLiver NeoplasmsReceptors, Cytoplasmic and NuclearTranscription FactorsAnimalsATP Binding Cassette Transporter, Subfamily B, Member 11Cell Cycle ProteinsCell Line, TumorCholestasisGene Expression Regulation, NeoplasticHep G2 CellsHumansLiverMaleABCB11 protein, humanAdaptor Proteins, Signal TransducingATP Binding Cassette Transporter, Subfamily B, Member 11Bile Acids and SaltsCell Cycle ProteinsReceptor, Farnesoid X-ActivatedReceptors, Cytoplasmic and NuclearTranscription FactorsYAP1 protein, humanYAP-Signaling Proteins

Identifiers

PMID40234449
PMCPMC12000370

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.