ArticleMolecular biology reports2025
Recombination, phylogenetic insights and co-existence dynamics of begomoviruses and satellite DNAs: implications for tomato viral disease management.
Article in Molecular biology reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
0 citing papers in PubMed.
No citing paper in PubMed yet.
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
10 authors.
Funding
Abstract
backgroundTomato leaf curl viral disease (ToLCV) is a major biotic stress, threatening tomato cultivation. However, limited information exists on the prevalence and diversity of ToLCV in Tamil Nadu, India and hence this study focused on identifying and characterizing such begomoviruses. METHODS AND
resultsTomato samples with infected symptoms were collected from major tomato-growing tracts of Tamil Nadu during 2023 to 2024 and subjected to polymerase chain reaction (PCR) using degenerate primers specific to ToLCV. Further, by employing rolling circle amplification (RCA), full-length sequences of viral genomes (∼2.7 kb), alphasatellites and betasatellites (∼1.35 kb each) were also obtained for three samples collected from different locations of Tamil Nadu (Dharmapuri (DPI-03), Krishnagiri (KGI-01) and Salem (SLM-01)). Diverse begomoviruses, including tomato leaf curl New Delhi virus (ToLCNDV), tomato leaf curl Palampur virus (ToLCPalV), tomato leaf curl Bangalore virus (ToLCBaV), and tomato leaf curl Gujarat virus (ToLCGUV) were identified in these three samples. Additionally, an alphasatellite (cotton leaf curl Multan alphasatellite, CLCuMuA), and two betasatellites (tomato leaf curl Bangalore betasatellite, ToLCBaB and tomato leaf curl Gujarat betasatellite, ToLCGUB) were also identified in KGI-01 and SLM-01. Evaluation of phylogenetic relationship and genetic variability revealed distinct clustering of begomoviruses and satellite sequences with high nucleotide diversity. In addition, recombinant analysis predicted inter- and intra- species recombination events.
conclusionThis study identified the co-occurrence of ToLCNDV with ToLCPalV, ToLCBaV with CLCuMuA and ToLCBaB, and ToLCGUV with ToLCGUB within the same plants. These findings underscore the diverse nature of the begomovirus-satellite complex infecting tomatoes in Tamil Nadu and emphasize the urgent need to develop effective plant protection strategies.
Indexed as
Identifiers
40232328What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.