Evidence map›Paper›PMID 40230526›Full record

ArticleiScience2025

Enhanced cell tracking using a GAN-based super-resolution video-to-video time-lapse microscopy generative model.

Abolfazl Zargari, Najmeh Mashhadi, S Ali Shariati

Abstract read
In one paragraph

Article in iScience, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

3 authors.

Abolfazl ZargariDepartment of Electrical and Computer Engineering, University of California, Santa Cruz, Santa Cruz, CA, USA.
Najmeh MashhadiDepartment of Computer Science and Engineering, University of California, Santa Cruz, Santa Cruz, CA, USA.
S Ali ShariatiDepartment of Biomolecular Engineering, University of California, Santa Cruz, Santa Cruz, CA, USA.

Funding

Molecular feedback between cell division cycle and differentiation in pluripotent stem cellsR35GM147395 · NIGMS · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI Ali Shariati · 2022 to 2026
$1.9M
Determining feedback mechanisms between cell cycle and cell fate in pluripotent cellsR00GM126027 · NIGMS · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI SHARIATI, ALI · 2020 to 2022
$747k
NIGMS NIH HHS R00 GM126027NIGMS NIH HHS R35 GM147395
6 · The paper itself

Abstract

Cells are among the most dynamic entities, constantly undergoing processes like growth, division, movement, and interaction with their environment and other cells. Time-lapse microscopy is central to capturing these dynamic behaviors, providing detailed spatiotemporal information at single-cell resolution in real time. Although deep learning has transformed cell segmentation, cell tracking remains challenging due to limited annotated time-lapse data. To address this, we introduce tGAN, a generative adversarial network (GAN)-based time-lapse microscopy generator that enhances the quality and diversity of synthetic annotated time-lapse microscopy data. Featuring a dual-resolution architecture, tGAN accurately captures both low- and high-resolution cellular details essential for accurate tracking. Our results show that tGAN generates high-quality, realistic annotated time-lapse videos with high temporal consistency and fine details. Importantly, annotated videos generated by tGAN enhance the performance of recent cell tracking models, reducing reliance on manual annotations. tGAN enhances deep learning's impact on bioimage analysis, enabling more generalizable cell tracking models.

Indexed as

Applied computingAutomationBiotechnologyComputer modeling

Identifiers

PMID40230526
PMCPMC11994914

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.