Evidence map›Paper›PMID 40229289›Full record

ArticleScientific data2025

Chromosome-level genome and annotation of the tetraploid Rhodiola kirilowii.

Jianbo Zhang, Wenji Zhao, Xiaohui Tang, Guofu Jia, Daxu Li, Chongjing Xia, Shiqie Bai

Abstract readDataset
In one paragraph

Article in Scientific data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Jianbo Zhang *Sichuan Academy of Grassland Sciences, Chengdu, China.
Wenji Zhao *Sichuan Academy of Grassland Sciences, Chengdu, China.
Xiaohui TangSichuan Academy of Grassland Sciences, Chengdu, China.
Guofu JiaSichuan Academy of Grassland Sciences, Chengdu, China.
Daxu LiSichuan Academy of Grassland Sciences, Chengdu, China. Idx136@163.com.
Chongjing XiaSchool of Life Science and Engineering, Southwest University of Science and Technology, Mianyang, China. chongjing.xia@wsu.edu.ORCID http://orcid.org/0000-0002-4865-7920
Shiqie BaiSichuan Academy of Grassland Sciences, Chengdu, China. baishiqie@swust.edu.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rhodiola kirilowii, a perennial medical herb native to China, is highly valued for its detoxification and anti-swelling properties, as well as its role as an adaptogen, making it an intriguing subject for understanding its medicinal potential and molecular biochemistry. In this study, we generated a high-quality chromosome-level reference genome of R. kirilowii achieved through a combination of Illumina short-read sequencing, PacBio long-read sequencing, and Hi-C sequencing techniques. The final assembly spans 1.92 Gb, including 40 homoeologous chromosomes and one sex chromosome, with a scaffold NG50 of 46.03 Mb, and a BUSCO completeness of 98.9%. Additionally, we annotated a total of 1.23 Gb of repetitive sequences, encompassing 63.88% of the entire genome, and identified 122,035 protein-coding genes. Each sub-genome achieved similar completeness and continuity. This high-quality reference genome provides critical insights into the genetic underpinnings of R. kirilowii's pharmacological properties, facilitating comparative genomics and the enhancement of its medicinal applications.

Indexed as

Chromosomes, PlantGenome, PlantRhodiolaTetraploidyMolecular Sequence Annotation

Identifiers

PMID40229289
PMCPMC11997064

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.