Evidence map›Paper›PMID 40227557›Full record

ArticleJournal of neuro-oncology2025

Pitfalls in the evaluation of CDKN2A copy number status in meningioma.

Valentina Zschernack, Giuseppe Pinto, Lea L Friker, Rebecca Klein, Tobias Goschzik, Evelyn Dörner, Andreas Waha, Christian Vokuhl, Hartmut Vatter, Torsten Pietsch

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Article in Journal of neuro-oncology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Valentina ZschernackInstitute of Neuropathology, DGNN Brain Tumor Reference Center, University Hospital Bonn, Bonn, Germany. valentina.zschernack@ukbonn.de.
Giuseppe PintoInstitute of Neuropathology, DGNN Brain Tumor Reference Center, University Hospital Bonn, Bonn, Germany.
Lea L FrikerInstitute of Neuropathology, DGNN Brain Tumor Reference Center, University Hospital Bonn, Bonn, Germany.
Rebecca KleinInstitute of Neuropathology, DGNN Brain Tumor Reference Center, University Hospital Bonn, Bonn, Germany.
Tobias GoschzikInstitute of Neuropathology, DGNN Brain Tumor Reference Center, University Hospital Bonn, Bonn, Germany.
Evelyn DörnerInstitute of Neuropathology, DGNN Brain Tumor Reference Center, University Hospital Bonn, Bonn, Germany.
Andreas WahaInstitute of Neuropathology, DGNN Brain Tumor Reference Center, University Hospital Bonn, Bonn, Germany.
Christian VokuhlSection of Pediatric Pathology, University Hospital Bonn, Bonn, Germany.
Hartmut VatterDepartment of Neurosurgery, University Hospital Bonn, Bonn, Germany.
Torsten PietschInstitute of Neuropathology, DGNN Brain Tumor Reference Center, University Hospital Bonn, Bonn, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeMeningiomas are the most common primary intracranial tumors, with anaplastic variants linked to a poor prognosis. CDKN2A deletions are key markers of malignancy and were integrated into the 2021 WHO classification for anaplastic meningiomas. Both p16 and MTAP immunohistochemistry (IHC) are employed to assess CDKN2A loss, though each marker has limitations in accuracy to varying degrees.

methodsThis study analyzed the concordance between molecular methods - DNA methylation profiling, molecular inversion probe (MIP) analysis, targeted next-generation sequencing (NGS), and fluorescence in situ hybridization (FISH) - and protein expression of p16 and MTAP in nine anaplastic meningiomas.

resultsWe showed that while p16 loss correlated well, MTAP protein was still expressed in three cases despite homozygous CDKN2A deletions. In those three cases the MTAP gene was hemizygously deleted. Additionally, a FISH probe encompassing both genes generated misleading results.

conclusionOur results suggest that MTAP IHC can be unreliable as a sole surrogate for CDKN2A loss in anaplastic meningioma. Quantitative copy-number analysis via high-resolution chromosomal arrays enables precise determination of CDKN2A deletions. Given the therapeutic implications of WHO grading, accurate molecular testing is critical. We conclude that negative p16/MTAP IHC in high-grade meningiomas should prompt molecular analysis for CDKN2A deletions, and MTAP IHC should not be solely relied upon for classification.

Indexed as

Biomarkers, TumorCyclin-Dependent Kinase Inhibitor p16DNA Copy Number VariationsMeningeal NeoplasmsMeningiomaAdultAgedDNA MethylationFemaleHumansIn Situ Hybridization, FluorescenceMaleMiddle AgedPurine-Nucleoside Phosphorylase5'-methylthioadenosine phosphorylaseBiomarkers, TumorCDKN2A protein, humanCyclin-Dependent Kinase Inhibitor p16Purine-Nucleoside Phosphorylase

Identifiers

PMID40227557
PMCPMC12170679

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.