Evidence map›Paper›PMID 40227256›Full record

ArticleIUCrJ2025

Damage before destruction? X-ray-induced changes in single-pulse serial femtosecond crystallography.

Lewis J Williams, Amy J Thompson, Philipp Dijkstal, Martin Appleby, Greta Assmann, Florian S N Dworkowski, Nicole Hiller, Chia Ying Huang, Tom Mason, Samuel Perrett and 7 more

Abstract read
In one paragraph

Article in IUCrJ, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Radiation damage in serial femtosecond crystallography studied in hemoglobin.Acta crystallographica. Section D, Structural biology · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Lewis J WilliamsSchool of Life Sciences, University of Essex, Wivenhoe Park, Colchester CO4 3SQ, United Kingdom.ORCID 0009-0002-4066-3899
Amy J ThompsonDiamond Light Source, Harwell Science and Innovation Campus, Didcot OX11 ODE, United Kingdom.ORCID 0000-0003-2174-2751
Philipp DijkstalSwissFEL, Paul Scherrer Institute, 5232 Villigen PSI, Switzerland.ORCID 0000-0003-3200-7824
Martin ApplebySwissFEL, Paul Scherrer Institute, 5232 Villigen PSI, Switzerland.ORCID 0000-0002-4936-4003
Greta AssmannSwissFEL, Paul Scherrer Institute, 5232 Villigen PSI, Switzerland.
Florian S N DworkowskiSwissFEL, Paul Scherrer Institute, 5232 Villigen PSI, Switzerland.ORCID 0000-0001-5004-8684
Nicole HillerSwissFEL, Paul Scherrer Institute, 5232 Villigen PSI, Switzerland.
Chia Ying HuangSwissFEL, Paul Scherrer Institute, 5232 Villigen PSI, Switzerland.ORCID 0000-0002-7676-0239
Tom MasonSwissFEL, Paul Scherrer Institute, 5232 Villigen PSI, Switzerland.ORCID 0009-0002-7823-6497
Samuel PerrettDepartment of Life Sciences, Imperial College London, London SW7 2AZ, United Kingdom.ORCID 0000-0002-6728-0778
Eduard PratSwissFEL, Paul Scherrer Institute, 5232 Villigen PSI, Switzerland.ORCID 0000-0002-7065-7417
Didier VoulotSwissFEL, Paul Scherrer Institute, 5232 Villigen PSI, Switzerland.
Bill PedriniSwissFEL, Paul Scherrer Institute, 5232 Villigen PSI, Switzerland.ORCID 0000-0003-4228-7874
John H BealeSwissFEL, Paul Scherrer Institute, 5232 Villigen PSI, Switzerland.ORCID 0000-0003-1171-2428
Michael A HoughDiamond Light Source, Harwell Science and Innovation Campus, Didcot OX11 ODE, United Kingdom.ORCID 0000-0001-7377-6713
Jonathan A R WorrallSchool of Life Sciences, University of Essex, Wivenhoe Park, Colchester CO4 3SQ, United Kingdom.ORCID 0000-0002-1863-834X
Robin L OwenDiamond Light Source, Harwell Science and Innovation Campus, Didcot OX11 ODE, United Kingdom.ORCID 0000-0002-2104-7057

Funding

HORIZON EUROPE Marie Sklodowska-Curie Actions 884104
6 · The paper itself

Abstract

Serial femtosecond crystallography (SFX) exploits extremely brief X-ray free-electron laser pulses to obtain diffraction data before destruction of the crystal. However, during the pulse X-ray-induced site-specific radiation damage can occur, leading to electronic state and/or structural changes. Here, we present a systematic exploration of the effect of single-pulse duration and energy (and consequently different dose rates) on site-specific radiation damage under typical SFX room-temperature experimental conditions. For the first time in SFX we directly measured the photon pulse duration, varying from less than 10 fs to more than 50 fs, and used three pulse energies to probe in-pulse damage in two radiation-sensitive proteins: the iron-heme peroxidase DtpAa and the disulfide-rich thaumatin. While difference-map features arising from radiation damage are observed, they do not lead to significant change in refined atomic coordinates or key bond lengths. Our work thus provides experimental verification that average atomic coordinates are not significantly perturbed by radiation damage in typical SFX experiments.

Indexed as

pulse durationradiation damageserial femtosecond crystallographyXFELs

Identifiers

PMID40227256
PMCPMC12044858

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.