Evidence map›Paper›PMID 40227048›Full record

ReviewAntimicrobial agents and chemotherapy2025

Genomics for antimicrobial resistance-progress and future directions.

Norelle L Sherry, Jean Y H Lee, Stefano G Giulieri, Christopher H Connor, Kristy Horan, Jake A Lacey, Courtney R Lane, Glen P Carter, Torsten Seemann, Adrian Egli and 2 more

Abstract readReview
In one paragraph

Review in Antimicrobial agents and chemotherapy, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed.

  1. Evolution, Mechanisms, and Therapeutic Implications of Mobile Tetracycline Destructases.BioEssays : news and reviews in molecular, cellular and developmental biology · 2026
    Review
  2. Review
  3. Article
  4. Review
  5. Whole genome sequencing of multidrug-resistantMicrobiology resource announcements · 2026
    Article
  6. Review
  7. Article
  8. Article
  9. Phylogenetic Relationships and Structural Conservation ofInternational journal of molecular sciences · 2026
    Article
  10. Review
  11. Genomic epidemiology ofOne health (Amsterdam, Netherlands) · 2026
    Article
  12. Review
  13. Article
  14. Article
  15. Review
  16. Article
  17. Review
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Norelle L SherryMicrobiological Diagnostic Unit Public Health Laboratory, Department of Microbiology and Immunology, University of Melbourne at the Doherty Institute for Infection and Immunity, Melbourne, Victoria, Australia.ORCID 0000-0002-7789-8360
Jean Y H LeeCentre for Pathogen Genomics, University of Melbourne, Melbourne, Victoria, Australia.ORCID 0000-0001-5751-8503
Stefano G GiulieriCentre for Pathogen Genomics, University of Melbourne, Melbourne, Victoria, Australia.ORCID 0000-0001-5366-1943
Christopher H ConnorCentre for Pathogen Genomics, University of Melbourne, Melbourne, Victoria, Australia.
Kristy HoranMicrobiological Diagnostic Unit Public Health Laboratory, Department of Microbiology and Immunology, University of Melbourne at the Doherty Institute for Infection and Immunity, Melbourne, Victoria, Australia.
Jake A LaceyMicrobiological Diagnostic Unit Public Health Laboratory, Department of Microbiology and Immunology, University of Melbourne at the Doherty Institute for Infection and Immunity, Melbourne, Victoria, Australia.
Courtney R LaneMicrobiological Diagnostic Unit Public Health Laboratory, Department of Microbiology and Immunology, University of Melbourne at the Doherty Institute for Infection and Immunity, Melbourne, Victoria, Australia.
Glen P CarterCentre for Pathogen Genomics, University of Melbourne, Melbourne, Victoria, Australia.
Torsten SeemannMicrobiological Diagnostic Unit Public Health Laboratory, Department of Microbiology and Immunology, University of Melbourne at the Doherty Institute for Infection and Immunity, Melbourne, Victoria, Australia.
Adrian EgliInstitute of Medical Microbiology, University of Zurich, Zurich, Switzerland.ORCID 0000-0002-3564-8603
Timothy P StinearCentre for Pathogen Genomics, University of Melbourne, Melbourne, Victoria, Australia.ORCID 0000-0003-0150-123X
Benjamin P HowdenMicrobiological Diagnostic Unit Public Health Laboratory, Department of Microbiology and Immunology, University of Melbourne at the Doherty Institute for Infection and Immunity, Melbourne, Victoria, Australia.ORCID 0000-0003-0237-1473

Funding

National Health and Medical Research Council GNT1196103
6 · The paper itself

Abstract

Antimicrobial resistance (AMR) is a critical global public health threat, with bacterial pathogens of primary concern. Pathogen genomics has revolutionized the study of bacterial pathogens and provided deep insights into the mechanisms and dissemination of AMR, with the precision of whole-genome sequencing informing better control strategies. However, generating actionable data from genomic surveillance and diagnostic efforts requires integration at the public health and clinical interface that goes beyond academic efforts to identify resistance mechanisms, undertake

Indexed as

Anti-Bacterial AgentsBacteriaDrug Resistance, BacterialGenomicsGenome, BacterialHumansWhole Genome SequencingAnti-Bacterial Agentsantimicrobial resistancegenomics

Identifiers

PMID40227048
PMCPMC12057382

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.