Evidence map›Paper›PMID 40226073›Full record

ArticleTranslational andrology and urology2025

The selection of Y chromosome microdeletion detection methods based on seminal analysis results: a comparison of high-throughput sequencing and fluorescence quantitative polymerase chain reaction (qPCR) applications.

Bai Dai, Dan Zhao, Ri-Na Sha, Ming Cang

Abstract read
In one paragraph

Article in Translational andrology and urology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Genetic and Epigenetic Risks of Male Infertility in ART.International journal of molecular sciences · 2025
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Bai Dai *Reproductive Medicine Center, the Affiliated Hospital of Inner Mongolia Medical University, Hohhot, China.
Dan Zhao *State Key Laboratory of Reproduction and Breeding in Grassland Livestock, Inner Mongolia University, Hohhot, China.
Ri-Na ShaPathology Department, the Affiliated Hospital of Inner Mongolia Medical University, Hohhot, China.
Ming CangState Key Laboratory of Reproduction and Breeding in Grassland Livestock, Inner Mongolia University, Hohhot, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Infertility significantly impacts numerous couples worldwide, and male infertility is a common contributing factor. Y chromosome microdeletions are potential genetic causes of male infertility. However, due to the lack of comparative studies based on semen analysis results, we have difficulty selecting an appropriate method for detecting Y chromosome microdeletions. This study aims to compare the application of high-throughput sequencing and fluorescence quantitative polymerase chain reaction (qPCR) in different types of infertility patients. Methods: This study used high-throughput sequencing [next-generation sequencing (NGS)] and fluorescence qPCR methods to detect Y chromosome microdeletions in two groups: one with azoospermia and another with oligoasthenoteratozoospermia (OAT), characterized by reduced sperm count and motility. Results: The results showed that NGS identified cases of Klinefelter syndrome (congenital bilateral absence of the vas deferens) that were not detected by qPCR in the azoospermia group. In the OAT group, high-throughput sequencing found a b2/b3 deletion of 1.80 Mb, while qPCR did not detect it. Conversely, qPCR identified an AZFd deletion in the OAT group, missed by high-throughput sequencing due to inadequate target region coverage. Conclusions: These research findings are significant for guiding personalized treatment of male infertility patients and provide valuable references for further exploration of the association between Y chromosome microdeletions and male infertility.

Indexed as

fluorescence quantitative polymerase chain reaction (fluorescence qPCR)high-throughput sequencinginfertilityseminal analysisY chromosome microdeletion

Identifiers

PMID40226073
PMCPMC11986546

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.