Evidence map›Paper›PMID 40224975›Full record

ArticleTranslational cancer research2025

A gene signature associated with cellular senescence serves as an important prognostic indicator in hepatocellular carcinoma.

Yongfeng Yan, Kai Chen, Qian Sun

Abstract read
In one paragraph

Article in Translational cancer research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Review
  2. Article
  3. VDAC2: an emerging pivotal and multifaceted regulator in tumor biology.Apoptosis : an international journal on programmed cell death · 2026
    Review
  4. Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Yongfeng YanDepartment of Laboratory, Tianjin Beichen Hospital, Tianjin, China.
Kai ChenDepartment of Laboratory, Tianjin Beichen Hospital, Tianjin, China.
Qian SunDepartment of Laboratory, Tianjin Beichen Hospital, Tianjin, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Hepatocellular carcinoma (HCC) is a lethal tumor. Predicting the prognosis of HCC remains challenging. Cellular senescence, which is one of the hallmarks of cancer, and its related prognostic-gene signature can provide critical information for clinical decision making. Our objective was to investigate the role of cellular senescence in HCC. Methods: The RNA sequencing data and clinical information of HCC patients from The Cancer Genome Atlas (TCGA) database were obtained. The HCC subtypes and a senescence score model were established to predict the prognosis of HCC. Results: In this study, patients from TCGA-HCC dataset were stratified into low- and high-risk groups based on cellular senescence-related genes. The analysis of the various subtypes revealed that the distribution of Cluster 1 (C1) was significantly correlated with numerous factors, including age, sex, pathological T stage, tumor node metastasis (TNM) classification, and grade staging. Further, the Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis indicated that the upregulated genes in the high-risk C1 group were primarily engaged in pathways related to the cell cycle, DNA replication, cellular senescence, extracellular matrix (ECM)-receptor interactions, and the mechanisms of mismatch repair. Conversely, the 90 downregulated genes were mainly associated with metabolic pathways, chemical carcinogenesis involving DNA adducts, complement and coagulation cascades, and the peroxisome proliferator-activated receptor (PPAR) signaling pathway. The resultant boxplots revealed significant differences in the populations of immune cells, such as B cells, endothelial cells, natural killer (NK) cells, macrophages, cluster of differentiation (CD)4+ T cells, and CD8+ T cells, in the C1 HCC samples compared to the C2 HCC samples. Additionally, the prognostic outcomes of the HCC patients were predicted using a cellular senescence-related gene model that included Conclusions: This study established a prognostic model of HCC based on cellular senescence-related gene expression. Our findings may provide insights that can be used to develop novel potential targeted therapies.

Indexed as

biomarkerscellular senescencecellular senescence-related signatureHepatocellular carcinoma (HCC)

Identifiers

PMID40224975
PMCPMC11985214

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.