Evidence map›Paper›PMID 40223687›Full record

ArticleChembiochem : a European journal of chemical biology2025

Characterization of the Cubamyces Menziesii Terpenome.

Létitia Leydet, Julie Couillaud, Agnès Amouric, Elise Courvoisier-Dezord, Carole Avesque, Thierry Giardina, Mireille Attolini, Pierre Rousselot-Pailley, Katia Duquesne, Marie-Noelle Rosso and 1 more

Erratum issuedAbstract read
In one paragraph

Article in Chembiochem : a European journal of chemical biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors.

Létitia LeydetCNRS, Centrale Med, ISM2, Aix Marseille Univ, Marseille, France.
Julie CouillaudCNRS, Centrale Med, ISM2, Aix Marseille Univ, Marseille, France.
Agnès AmouricCNRS, Centrale Med, ISM2, Aix Marseille Univ, Marseille, France.
Elise Courvoisier-DezordCNRS, Centrale Med, ISM2, Aix Marseille Univ, Marseille, France.
Carole AvesqueCNRS, Centrale Med, ISM2, Aix Marseille Univ, Marseille, France.
Thierry GiardinaCNRS, Centrale Med, ISM2, Aix Marseille Univ, Marseille, France.
Mireille AttoliniCNRS, Centrale Med, ISM2, Aix Marseille Univ, Marseille, France.
Pierre Rousselot-PailleyCNRS, Centrale Med, ISM2, Aix Marseille Univ, Marseille, France.ORCID https://orcid.org/0000-0002-7658-9056
Katia DuquesneCNRS, Centrale Med, ISM2, Aix Marseille Univ, Marseille, France.ORCID https://orcid.org/0000-0001-7668-9180
Marie-Noelle RossoINRAE, Aix Marseille Univ, BBF, Biodiversité et Biotechnologie Fongiques, 13009, Marseille, France.ORCID https://orcid.org/0000-0001-8317-7220
Gilles IacazioCNRS, Centrale Med, ISM2, Aix Marseille Univ, Marseille, France.ORCID https://orcid.org/0000-0003-3168-5500

Funding

German Federal Ministry of Education and Research 031 A538A de.NBI-RBCMinistère de la Recherche et de l'Enseignement Supérieur 2021AIXM0188/010ED250Ministère de la Recherche et de l'Enseignement Supérieur 2024AIXM0267/010ED250Ministry of Science, Research and the Arts Baden-Württemberg
6 · The paper itself

Abstract

Long-lasting polypore fungi are significant producers of terpene cyclases of high interest for medicinal or biotechnological applications. Following the 1000 Fungal Genomes initiative launched by the Joint Genome Institute, the genome of Cubamyces (C.) menziesii and identified 18 genes encoding sesquiterpene cyclases (STCs) is explored. In a search for robust catalysts suitable for practical applications, the 18 codon-optimized open reading frames are cloned and overproduced the C. menziesii STCs in Escherichia coli. In ten cases, the catalytically active enzyme is purified and tested with three chemically synthesized linear diphosphates: geranyl diphosphate, farnesyl diphosphate (FDP), and geranylgeranyl diphosphate. Only FDP proved to be a substrate for these 10 enzymes. The product specificity of all these enzymes is determined by (GC-MS) gas chromatography mass spectrometry and (NMR) nuclear magnetic resonance analysis. Among the 10 enzymes, four produced a predominant compound, four yielded two main compounds, and the remaining two acted as a multiproduct catalysts. This work sheds light on the potential sesquiterpenes involved in the chemical ecology of the polypore C. menziesii and provides evidence for the potential of Polyporales fungi in the identification of new sesquiterpene cyclase activities.

Indexed as

Alkyl and Aryl TransferasesTerpenesEscherichia coliGas Chromatography-Mass SpectrometryPolyisoprenyl PhosphatesSesquiterpenesSubstrate SpecificityAlkyl and Aryl Transferasesfarnesyl pyrophosphatePolyisoprenyl PhosphatesSesquiterpenesTerpenesCubamyces menziesiiphylogenetic treessesquiterpene cyclases

Identifiers

PMID40223687
PMCPMC12376244

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.