Evidence map›Paper›PMID 40222261›Full record

ArticleJournal of inorganic biochemistry2025

Regulation of ferryl reactivity by the cytochrome P450 decarboxylase OleT.

Hannah E Gering, Olivia M Manley, Alexis J Holwerda, Job L Grant, Steven C Ratigan, Thomas M Makris

Abstract read
In one paragraph

Article in Journal of inorganic biochemistry, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Hannah E GeringDepartment of Structural and Molecular Biochemistry, North Carolina State University, Raleigh, NC 27695, United States.
Olivia M ManleyDepartment of Structural and Molecular Biochemistry, North Carolina State University, Raleigh, NC 27695, United States.
Alexis J HolwerdaDepartment of Chemistry and Biochemistry, University of South Carolina, Columbia, SC 29208, United States.
Job L GrantDepartment of Chemistry and Biochemistry, University of South Carolina, Columbia, SC 29208, United States.
Steven C RatiganDepartment of Chemistry and Biochemistry, University of South Carolina, Columbia, SC 29208, United States.
Thomas M MakrisDepartment of Structural and Molecular Biochemistry, North Carolina State University, Raleigh, NC 27695, United States; Department of Chemistry, North Carolina State University, Raleigh, NC 27695, United States. Electronic address: tmmakris@ncsu.edu.

Funding

Divergence of Carboxylate-Bridged Diiron Enzymes for Natural Product BiosynthesisR01GM135315 · NIGMS · UNIVERSITY OF SOUTH CAROLINA AT COLUMBIA · PI MAKRIS, THOMAS M · 2019 to 2022
$1.4M
NIGMS NIH HHS R01 GM135315
6 · The paper itself

Abstract

The cytochrome P450 OleT catalyzes the decarboxylation of long-chain fatty acid substrates to produce terminal alkenes using hydrogen peroxide as a co-substrate. The facile activation of peroxide to form Compound I in the first step of the reaction, and subsequent CC bond cleavage mediated by Compound II, provides a unique opportunity to visualize both ferryl intermediates using transient kinetic approaches. Analysis of the Arrhenius behavior yields activation barriers of ∼6 kcal/mol and ∼ 18 kcal/mol for the decay of Compound I and Compound II respectively. The influence of the secondary coordination sphere, probed through site-directed mutagenesis approaches, suggests that restriction of the donor-acceptor distance contributes to the reactivity of Compound I. The reactivity of Compound II was further probed using kinetic solvent isotope effect approaches, confirming that the large barrier owes to a proton-gated mechanism in the decarboxylation reaction coordinate. Hydrogen-bonding to an active-site histidine (H85) in the distal pocket plays a key role in this process.

Indexed as

Bacterial ProteinsCarboxy-LyasesCytochrome P-450 Enzyme SystemCatalytic DomainDecarboxylationHydrogen BondingHydrogen PeroxideKineticsMutagenesis, Site-DirectedBacterial ProteinsCarboxy-LyasesCytochrome P-450 Enzyme SystemHydrogen PeroxideCompound ICYP152Cytochrome P450

Identifiers

PMID40222261
PMCPMC12210280

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.