Evidence map›Paper›PMID 40221836›Full record

ArticleBiophysical journal2025

Experimental kinetic mechanism of P53 condensation-amyloid aggregation.

Silvia S Borkosky, Ramón Peralta-Martínez, Alicia Armella-Sierra, Sebastián A Esperante, Leonardo Lizárraga, Javier García-Pardo, Salvador Ventura, Ignacio E Sánchez, Gonzalo de Prat-Gay

Abstract read
In one paragraph

Article in Biophysical journal, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Silvia S BorkoskyLaboratorio de Estructura-Función e Ingeniería de Proteínas, Fundación Instituto Leloir- Instituto de Investigaciones Bioquímicas de Buenos Aires (IIB-BA), Buenos Aires, Argentina.
Ramón Peralta-MartínezLaboratorio de Estructura-Función e Ingeniería de Proteínas, Fundación Instituto Leloir- Instituto de Investigaciones Bioquímicas de Buenos Aires (IIB-BA), Buenos Aires, Argentina.
Alicia Armella-SierraLaboratorio de Estructura-Función e Ingeniería de Proteínas, Fundación Instituto Leloir- Instituto de Investigaciones Bioquímicas de Buenos Aires (IIB-BA), Buenos Aires, Argentina.
Sebastián A EsperanteCentro de Rediseño de Proteínas (CRIP), CONICET, 25 de Mayo y Francia (1650), Universidad Nacional de San Martin (UNSAM), Buenos Aires, Argentina.
Leonardo LizárragaCentro de Investigaciones en Bionanociencias (CIBION), Buenos Aires, Argentina.
Javier García-PardoInstitut de Biotecnologia i de Biomedicina (IBB) and Departament de Bioquímica i Biologia Molecular, Universitat Autònoma de Barcelona, Barcelona, Spain.
Salvador VenturaInstitut de Biotecnologia i de Biomedicina (IBB) and Departament de Bioquímica i Biologia Molecular, Universitat Autònoma de Barcelona, Barcelona, Spain.
Ignacio E SánchezLaboratorio de Fisiología de Proteínas, Instituto de Química Biológica de la Facultad de Ciencias Exactas y Naturales (IQUIBICEN)-CONICET, Universidad de Buenos Aires, Buenos Aires, Argentina.
Gonzalo de Prat-GayLaboratorio de Estructura-Función e Ingeniería de Proteínas, Fundación Instituto Leloir- Instituto de Investigaciones Bioquímicas de Buenos Aires (IIB-BA), Buenos Aires, Argentina. Electronic address: gpg@leloir.org.ar.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The tumor suppressor p53 modulates the transcription of a variety of genes, constituting a protective barrier against anomalous cellular proliferation. High-frequency "hotspot" mutations result in loss of function by the formation of amyloid-like aggregates that correlate with cancerous progression. We show that full-length p53 undergoes spontaneous homotypic condensation at submicromolar concentrations and in the absence of crowders to yield dynamic coacervates that are stoichiometrically dissolved by DNA. These coacervates fuse and evolve into hydrogel-like clusters with strong thioflavin T binding capacity, which further evolve into fibrillar species with a clearcut branching growth pattern. The amyloid-like coacervates can be rescued by the human papillomavirus master regulator E2 protein to yield large regular droplets. Furthermore, we kinetically dissected an overall condensation mechanism, which consists of a nucleation-growth process by the sequential addition of p53 tetramers, leading to discretely sized and monodisperse early condensates followed by coalescence into bead-like coacervates that slowly evolve to the fibrillar species. Our results suggest strong similarities to condensation-to-amyloid transitions observed in neurological aggregopathies. Mechanistic insights uncover novel key early and intermediate stages of condensation that can be targeted for p53 rescuing drug discovery.

Indexed as

AmyloidProtein AggregatesTumor Suppressor Protein p53BenzothiazolesHumansKineticsProtein MultimerizationAmyloidBenzothiazolesProtein AggregatesTumor Suppressor Protein p53

Identifiers

PMID40221836
PMCPMC12242428

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.