Evidence map›Paper›PMID 40221650›Full record

ArticleBMC pediatrics2025

Butyrate inhibits histone deacetylase 2 expression to alleviate liver fibrosis in biliary atresia.

Yilin Zhao, Xiaodan Xu, Shaowen Liu, Xueting Wang, Jiayinaxi Musha, Tengfei Li, Liang Ge, Yan Sun, Shujian Zhang, Li Zhao and 1 more

Abstract read
In one paragraph

Article in BMC pediatrics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Review
  2. Review
  3. Gut-Derived Sodium Butyrate Attenuates Liver Fibrosis by Inhibiting Aerobic Glycolysis via the HDAC3/c-Myc Signaling Axis.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2026
    Article
  4. Article
  5. Review
  6. [Histone deacetylases and alcohol-related liver disease].Zhong nan da xue xue bao. Yi xue ban = Journal of Central South University. Medical sciences · 2026
    Review
  7. Article
  8. Review
  9. Review
  10. Gut microbiome in biliary atresia.World journal of pediatric surgery · 2026
    Review
  11. Review
  12. Article
  13. Review
  14. Review
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Yilin Zhao *Graduate College, Tianjin Medical University, Tianjin, China.
Xiaodan Xu *Department of Pediatric Surgery, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, Hubei Province, China.
Shaowen LiuGraduate College, Tianjin Medical University, Tianjin, China.
Xueting WangDepartment of Pediatric Surgery, Xinjiang Yili Friendship Hospital, Yili, China.
Jiayinaxi MushaGraduate College, Tianjin Medical University, Tianjin, China.
Tengfei LiGraduate College, Tianjin Medical University, Tianjin, China.
Liang GeDepartment of General Surgery, Tianjin Children's Hospital, LongYan Road 238, Beichen District, Tianjin, 300134, P. R. China.
Yan SunDepartment of General Surgery, Tianjin Children's Hospital, LongYan Road 238, Beichen District, Tianjin, 300134, P. R. China.
Shujian ZhangDepartment of General Surgery, Tianjin Children's Hospital, LongYan Road 238, Beichen District, Tianjin, 300134, P. R. China.
Li ZhaoDepartment of Pathology, Tianjin Children's Hospital, Tianjin, China.
Jianghua ZhanDepartment of General Surgery, Tianjin Children's Hospital, LongYan Road 238, Beichen District, Tianjin, 300134, P. R. China. zhanjianghuatj@163.com.

Funding

Tianjin Municipa Science and Technology Bureau Major Projects 21ZXGWSY00070Xinjiang Uygur Autonomous Region Science Foundation Project 2022D01A27
6 · The paper itself

Abstract

backgroundPrevious studies have found a reduction in butyrate-producing bacteria in the gut microbiota of infants with biliary atresia (BA). Butyrate is also an important inhibitor of histone deacetylase 2 (HDAC2). This study aims to explore how butyrate alleviates liver fibrosis in BA through HDAC2.

methodsFibrosis-related pathways associated with butyrate were analyzed using the GSE46960 database. BA liver sections were used to validate factor expression. The effects of HDAC2 and butyrate and the pathway were performed in vitro experiments. Butyrate intervention was performed in bile duct ligation (BDL) mice, and alterations in the gut microbiota were analyzed using fecal 16S rRNA sequencing. The impact of butyrate and related pathways on liver fibrosis in BDL mice was further evaluated.

resultsThe IL-6/STAT3 pathway showed a clear correlation with butyrate in BA. HDAC2 promoted LX-2 activation via the IL-6/STAT3 pathway, while butyrate inhibited LX-2 activation by suppressing HDAC2. Butyrate not only alleviated liver fibrosis but also improved the gut microbiota structure in BDL mice.

conclusionButyrate may improve liver fibrosis in BA by regulating HDAC2 expression and modulating the IL-6/STAT3 pathway. Therefore, butyrate could serve as a promising therapeutic option for mitigating liver fibrosis in BA.

Indexed as

Biliary AtresiaButyratesHistone Deacetylase 2Liver CirrhosisAnimalsDisease Models, AnimalGastrointestinal MicrobiomeHumansInterleukin-6MaleMiceMice, Inbred C57BLSignal TransductionSTAT3 Transcription FactorButyratesHdac2 protein, mouseHistone Deacetylase 2Interleukin-6STAT3 Transcription FactorBiliary atresiaButyrateFibrosisHDAC2IL-6STAT3

Identifiers

PMID40221650
PMCPMC11992845

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.