Evidence map›Paper›PMID 40221416›Full record

ArticleScientific data2025

TRUSTED: The Paired 3D Transabdominal Ultrasound and CT Human Data for Kidney Segmentation and Registration Research.

William Ndzimbong, Cyril Fourniol, Loic Themyr, Nicolas Thome, Yvonne Keeza, Benoît Sauer, Pierre-Thierry Piéchaud, Arnaud Méjean, Jacques Marescaux, Daniel George and 3 more

Abstract readDataset
In one paragraph

Article in Scientific data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

William NdzimbongUniversity of Strasbourg, ICUBE, Strasbourg, France. william.ndzimbong@ircad.fr.
Cyril FourniolDepartment of Urology, HEGP, APHP, Paris, France.
Loic ThemyrConservatoire National des Arts et Métiers (CNAM), CEDRIC, Paris, France.
Nicolas ThomeSorbonne University, CNRS, ISIR, Paris, France.
Yvonne KeezaResearch Institute against Digestive Cancer (IRCAD), Kigali, Rwanda.
Benoît SauerDepartment of Radiology, Clinique Sainte-Anne, Groupe MIM, Strasbourg, France.
Pierre-Thierry PiéchaudClinique Saint Augustin, ELSAN, Bordeaux, France.
Arnaud MéjeanHôpital Européen Georges-Pompidou, Paris, France.
Jacques MarescauxResearch Institute against Digestive Cancer (IRCAD), Strasbourg, France.
Daniel GeorgeUniversity of Strasbourg, CNRS, ICUBE, Strasbourg, France.
Didier MutterInstitute of Image-Guided Surgery (IHU), Strasbourg, France.
Alexandre HostettlerResearch Institute against Digestive Cancer (IRCAD), Strasbourg, France.
Toby CollinsResearch Institute against Digestive Cancer (IRCAD), Strasbourg, France. toby.collins@ircad.fr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Inter-modal image registration (IMIR) and image segmentation with abdominal Ultrasound (US) data have many important clinical applications, including image-guided surgery, automatic organ measurement, and robotic navigation. However, research is severely limited by the lack of public datasets. We propose TRUSTED (the Tridimensional Renal Ultra Sound TomodEnsitometrie Dataset), comprising paired transabdominal 3DUS and CT kidney images from 48 human patients (96 kidneys), including segmentation, and anatomical landmark annotations by two experienced radiographers. Inter-rater segmentation agreement was over 93% (Dice score), and gold-standard segmentations were generated using the STAPLE algorithm. Seven anatomical landmarks were annotated, for IMIR systems development and evaluation. To validate the dataset's utility, 4 competitive Deep-Learning models for kidney segmentation were benchmarked, yielding average DICE scores from 79.63% to 90.09% for CT, and 70.51% to 80.70% for US images. Four IMIR methods were benchmarked, and Coherent Point Drift performed best with an average Target Registration Error of 4.47 mm and Dice score of 84.10%. The TRUSTED dataset may be used freely to develop and validate segmentation and IMIR methods.

Indexed as

Imaging, Three-DimensionalKidneyTomography, X-Ray ComputedAbdomenAlgorithmsDeep LearningHumansUltrasonography

Identifiers

PMID40221416
PMCPMC11993632

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.