Evidence map›Paper›PMID 40217128›Full record

ArticleNature microbiology2025

Host AAA-ATPase VCP/p97 lyses ubiquitinated intracellular bacteria as an innate antimicrobial defence.

Sourav Ghosh, Suvapriya Roy, Navin Baid, Udit Kumar Das, Sumit Rakshit, Paulomi Sanghavi, Dipasree Hajra, Sayani Das, Sneha Menon, Mohammad Sahil and 8 more

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Article in Nature microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. A diverse family of bacterial deubiquitinases is defined by theProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  7. Extract to lyse bacterial pathogens.Nature microbiology · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Sourav GhoshDepartment of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Mumbai, Maharashtra, India.ORCID http://orcid.org/0000-0003-2070-4681
Suvapriya RoyDepartment of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Mumbai, Maharashtra, India.
Navin BaidDepartment of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Mumbai, Maharashtra, India.
Udit Kumar DasDepartment of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Mumbai, Maharashtra, India.
Sumit RakshitDepartment of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Mumbai, Maharashtra, India.
Paulomi SanghaviDepartment of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Mumbai, Maharashtra, India.
Dipasree HajraDepartment of Microbiology and Cell Biology, Indian Institute of Science, Bengaluru, Karnataka, India.
Sayani DasDepartment of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Mumbai, Maharashtra, India.
Sneha MenonTata Institute of Fundamental Research, Hyderabad, Telangana, India.
Mohammad SahilTata Institute of Fundamental Research, Hyderabad, Telangana, India.
Sudipti ShawDepartment of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Mumbai, Maharashtra, India.ORCID http://orcid.org/0009-0001-6378-1284
Raju S RajmaniDepartment of Microbiology and Cell Biology, Indian Institute of Science, Bengaluru, Karnataka, India.
Harikrishna AdicherlaCSIR-Centre for Cellular and Molecular Biology, Habsiguda, Hyderabad, Telangana, India.
Sandip KaledhonkarDepartment of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Mumbai, Maharashtra, India.
Jagannath MondalTata Institute of Fundamental Research, Hyderabad, Telangana, India.
Dipshikha ChakravorttyDepartment of Microbiology and Cell Biology, Indian Institute of Science, Bengaluru, Karnataka, India.ORCID http://orcid.org/0000-0002-7838-5145
Roop MallikDepartment of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Mumbai, Maharashtra, India.
Anirban BanerjeeDepartment of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Mumbai, Maharashtra, India. abanerjee@iitb.ac.in.ORCID http://orcid.org/0000-0002-4229-5981

Funding

DST | Science and Engineering Research Board (SERB) SPR/2019/000808
6 · The paper itself

Abstract

Cell-autonomous immunity prevents intracellular pathogen growth through mechanisms such as ubiquitination and proteasomal targeting of bacteria for degradation. However, how the proteasome eradicates ubiquitinated bacteria has remained unclear. Here we show that host AAA-ATPase, VCP/p97, associates with diverse cytosol-exposed ubiquitinated bacteria (Streptococcus pneumoniae, Salmonella enterica serovar Typhimurium, Streptococcus pyogenes) and requires the ATPase activity in its D2 domain to reduce intracellular bacterial loads. Combining optical trap approaches along with molecular dynamic simulations, in vitro reconstitution and immunogold transmission electron microscopy, we demonstrate that p97 applies mechanical force to extract ubiquitinated surface proteins, BgaA and PspA, from S. pneumoniae cell membranes. This causes extensive membrane lysis and release of cytosolic content, thereby killing the pathogen. Further, p97 also controls S. pneumoniae proliferation in mice, ultimately protecting from fatal sepsis. Overall, we discovered a distinct innate antimicrobial function of p97 that can protect the host against lethal bacterial infections.

Indexed as

Adenosine TriphosphatasesHost-Pathogen InteractionsImmunity, InnateValosin Containing ProteinAnimalsBacterial ProteinsCell MembraneHumansMiceMice, Inbred C57BLNuclear ProteinsSalmonella typhimuriumStreptococcus pneumoniaeStreptococcus pyogenesUbiquitinationAdenosine TriphosphatasesBacterial ProteinsNuclear Proteinsp97 ATPaseValosin Containing ProteinVCP protein, human

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.