Evidence map›Paper›PMID 40216774›Full record

ArticleNature communications2025

Autophagy is induced during plant grafting to promote wound healing.

Ken-Ichi Kurotani, Daiki Shinozaki, Kentaro Okada, Ryo Tabata, Yaichi Kawakatsu, Ryohei Sugita, Yuki Utsugi, Koji Okayasu, Moe Mori, Keitaro Tanoi and 5 more

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. PLETHORA-autophagy axis activates organ regeneration through ROS modulation.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Micrografting inBio-protocol · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Ken-Ichi Kurotani *Bioscience and Biotechnology Center, Nagoya University, Nagoya, Japan.ORCID http://orcid.org/0000-0003-1618-8557
Daiki Shinozaki *Department of Life Sciences, School of Agriculture, Meiji University, Kawasaki, Japan.
Kentaro Okada *Bioscience and Biotechnology Center, Nagoya University, Nagoya, Japan.
Ryo Tabata *Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya, Japan.
Yaichi Kawakatsu *Bioscience and Biotechnology Center, Nagoya University, Nagoya, Japan.
Ryohei SugitaIsotope Facility for Agricultural Education and Research, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan.ORCID http://orcid.org/0009-0000-0858-1821
Yuki UtsugiDepartment of Life Sciences, School of Agriculture, Meiji University, Kawasaki, Japan.
Koji OkayasuGraduate School of Bioagricultural Sciences, Nagoya University, Nagoya, Japan.
Moe MoriGraduate School of Bioagricultural Sciences, Nagoya University, Nagoya, Japan.
Keitaro TanoiIsotope Facility for Agricultural Education and Research, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan.ORCID http://orcid.org/0000-0001-7545-2771
Yumi GotoCenter for Sustainable Resource Science, RIKEN, Yokohama, Japan.
Mayuko SatoCenter for Sustainable Resource Science, RIKEN, Yokohama, Japan.ORCID http://orcid.org/0000-0002-9876-5612
Kiminori ToyookaCenter for Sustainable Resource Science, RIKEN, Yokohama, Japan.ORCID http://orcid.org/0000-0002-6414-5191
Kohki YoshimotoDepartment of Life Sciences, School of Agriculture, Meiji University, Kawasaki, Japan. kohki_yoshimoto@meiji.ac.jp.ORCID http://orcid.org/0000-0003-3948-3751
Michitaka NotaguchiBioscience and Biotechnology Center, Nagoya University, Nagoya, Japan. notaguchi.michitaka.4k@kyoto-u.ac.jp.ORCID http://orcid.org/0000-0003-0831-2108

Funding

MEXT | Japan Science and Technology Agency (JST) JPMJTR194GMEXT | Japan Society for the Promotion of Science (JSPS) 18KT0040MEXT | Japan Society for the Promotion of Science (JSPS) 19H05361MEXT | Japan Society for the Promotion of Science (JSPS) 19H05713MEXT | Japan Society for the Promotion of Science (JSPS) 21H00368MEXT | Japan Society for the Promotion of Science (JSPS) 21H05657MEXT | Japan Society for the Promotion of Science (JSPS) 22H04926MEXT | Japan Society for the Promotion of Science (JSPS) 22K06181MEXT | Japan Society for the Promotion of Science (JSPS) 24H02142New Energy and Industrial Technology Development Organization (NEDO) JPNP20004
6 · The paper itself

Abstract

Grafting is an agricultural technique that joins tissues from different plants to obtain useful rootstock traits. However, cellular processes involved in joint tissue repair remain poorly understood. We analyzed Nicotiana benthamiana (Nb) and Arabidopsis thaliana (At) interfamily heterografting as a high-stress model and At homografting as a low-stress model. Transmission electron micrographs reveal the formation of autophagic structures in cells near the graft boundary over a long period in Nb/At interfamily grafts and in a short period of a few days in At homografts. Using a GFP-ATG8 marker line, the autophagosomes were observed in the cells near the graft boundary, especially on the scion side, where nutrient depletion occurred. Grafting of At autophagy-defective mutants decreases grafting success rates and post-grafting growth. NbATG5 knockdown suppresses graft establishment in Nb/At interfamily heterografts. Moreover, At autophagy-defective mutants show reduced callus formation directed to wounds under the nutrient-deficient conditions. These results suggest that autophagy is induced during grafting, promoting callus formation and contributing to tissue connectivity.

Indexed as

ArabidopsisAutophagyNicotianaWound HealingArabidopsis ProteinsAutophagosomesAutophagy-Related Protein 5Autophagy-Related Protein 8 FamilyGene Expression Regulation, PlantMutationPlants, Genetically ModifiedArabidopsis ProteinsATG8 protein, ArabidopsisAutophagy-Related Protein 5Autophagy-Related Protein 8 Family

Identifiers

PMID40216774
PMCPMC11992148

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.