Evidence map›Paper›PMID 40216766›Full record

ArticleNature communications2025

A Bacteroides thetaiotaomicron genetic locus encodes activities consistent with mucin O-glycoprotein processing and N-acetylgalactosamine metabolism.

Didier A Ndeh, Sirintra Nakjang, Kurt J Kwiatkowski, Claire Sawyers, Nicole M Koropatkin, Robert P Hirt, David N Bolam

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed.

  1. Discovery of a secretedGut microbes · 2026
    Article
  2. Gut microbes · 2026
    Article
  3. Review
  4. Gut microbes · 2026
    Article
  5. Article
  6. Article
  7. Article
  8. Extracellular metabolite production byApplied and environmental microbiology · 2026
    Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Fecal Material of Captive Wild Animals as Source of CAZymes With Application Potential.Chembiochem : a European journal of chemical biology · 2026
    Article
  14. Article
  15. Degradation of mucinbioRxiv : the preprint server for biology · 2026
    Article
  16. Comparative Genomic and Functional Profiling of ECM-Targeting Enzymes inbioRxiv : the preprint server for biology · 2026
    Article
  17. Review
  18. Article
  19. Mucinase fromFrontiers in microbiology · 2026
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Didier A NdehDivision of Plant Sciences, School of Life Sciences, University of Dundee, Dundee, UK. dndeh001@dundee.ac.uk.ORCID http://orcid.org/0000-0001-7875-1638
Sirintra NakjangPrecision Medicine Centre of Excellence, Queen's University Belfast, Belfast, UK.
Kurt J KwiatkowskiDepartment of Microbiology and Immunology, University of Michigan Medical School, Ann Arbor, MI, USA.
Claire SawyersBiosciences Institute, Medical School, Newcastle University, Newcastle upon Tyne, NE2 4HH, UK.
Nicole M KoropatkinDepartment of Microbiology and Immunology, University of Michigan Medical School, Ann Arbor, MI, USA.ORCID http://orcid.org/0000-0002-2459-3336
Robert P HirtBiosciences Institute, Medical School, Newcastle University, Newcastle upon Tyne, NE2 4HH, UK. robert.hirt@newcastle.ac.uk.ORCID http://orcid.org/0000-0002-3760-9958
David N BolamBiosciences Institute, Medical School, Newcastle University, Newcastle upon Tyne, NE2 4HH, UK. david.bolam@newcastle.ac.uk.ORCID http://orcid.org/0000-0003-0314-3122

Funding

University of Michigan Center for Gastrointestinal ResearchP30DK034933 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MERCHANT, JUANITA L. · 1986 to 2021
$22.5M
Commonwealth Scholarship Commission (CSC) CMCS-2010-86NIDDK NIH HHS P30 DK034933Royal Society URF\R1\221864
6 · The paper itself

Abstract

The gut microbiota is a key modulator of human health and the status of major diseases including cancer, diabetes and inflammatory bowel disease. Central to microbiota survival is the ability to metabolise complex dietary and host-derived glycans, including intestinal mucins. The prominent human gut microbe Bacteroides thetaiotaomicron (B. theta) is a versatile and highly efficient complex glycan degrader thanks to the expansion of gene clusters termed polysaccharide utilisation loci (PULs). While the mechanism of action for several singular dietary glycan-induced PULs have been elucidated, studies on the unusually high number of mucin-inducible PULs in B. theta significantly lag behind. Here we show that a mucin inducible PUL BT4240-50 encodes activities consistent with the processing and metabolism of mucin O-glycoproteins and their core sugar N-acetylgalactosamine (GalNAc). PUL BT4240-50 was also shown to be important for competitive growth on mucins in vitro, encoding a kinase (BT4240) critical for GalNAc metabolism. Additionally, BT4240-kinase was shown to be essential for glycosaminoglycan metabolism, extending the PULs function beyond mucins. These data advance our understanding of glycoprotein metabolism at mucosal surfaces, highlighting GalNAc as a key metabolite for competitive microbial survival in the human gut.

Indexed as

AcetylgalactosamineBacteroides thetaiotaomicronGenetic LociGlycoproteinsMucinsBacterial ProteinsGastrointestinal MicrobiomeHumansAcetylgalactosamineBacterial ProteinsGlycoproteinsMucins

Identifiers

PMID40216766
PMCPMC11992087

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.