Evidence map›Paper›PMID 40216247›Full record

ArticleThe Journal of biological chemistry2025

Small glycomimetic antagonists of the cytomegalovirus glycoprotein UL141 prevent binding to TRAIL death receptor.

Ivana Nemčovičová, Juraj Kóňa, Monika Poláková, Tomáš Klunda, Andrej Bitala, Mário Benko, Simona Lenhartová, Marek Nemčovič

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Ivana NemčovičováBiomedical Research Center (BMC), Slovak Academy of Sciences, Bratislava, Slovakia. Electronic address: viruivka@savba.sk.
Juraj KóňaInstitute of Chemistry, Slovak Academy of Sciences, Bratislava, Slovakia; Medical Vision, o. z., Bratislava, Slovakia.
Monika PolákováInstitute of Chemistry, Slovak Academy of Sciences, Bratislava, Slovakia.
Tomáš KlundaInstitute of Chemistry, Slovak Academy of Sciences, Bratislava, Slovakia.
Andrej BitalaBiomedical Research Center (BMC), Slovak Academy of Sciences, Bratislava, Slovakia.
Mário BenkoBiomedical Research Center (BMC), Slovak Academy of Sciences, Bratislava, Slovakia.
Simona LenhartováBiomedical Research Center (BMC), Slovak Academy of Sciences, Bratislava, Slovakia.
Marek NemčovičInstitute of Chemistry, Slovak Academy of Sciences, Bratislava, Slovakia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Human cytomegalovirus (HCMV) UL141 inhibits immune recognition of virally infected cells by natural killer cells and cytotoxic T cells through modulation of cellular receptors (e.g., TRAIL-R2/-R1, CD155, CD112). Recent findings suggest that UL141 is also a critical component of the HCMV virion, further emphasizing its significance. In this study, we aimed to develop a small synthetic compound as a UL141 antagonist. Building on our crystal structure analysis, we designed compounds to specifically bind viral UL141, thereby blocking its interaction with target receptors thus inhibiting its immunoevasive functions. We evaluated a small library of synthesized compounds composed of diverse saccharide units conjugated with nonsaccharide moieties, such as nonionic glycolipids, pyrrolidines, and "click" conjugates. An ELISA-like TMB-binding assay, coupled with dynabeads coating, was employed to assess the ability of these compounds to inhibit TRAIL-R2 binding in vitro. The most promising compounds capable of inhibiting complex formation were further analyzed using surface plasmon resonance. Compound 18 exhibited the strongest binding affinity to UL141, with KD of 2.93 μM. Molecular docking studies identified specific binding sites on UL141, and the fragmented molecular orbital method was applied to evaluate interaction energy patterns between the antagonist and the UL141 protein. Mutational analysis was conducted to validate the identified binding sites on UL141. Additionally, cellular cytotoxicity assays were performed to confirm the nontoxic properties of these compounds. Collectively, our findings suggest that synthetic glycomimetics represent promising candidates for targeting the viral glycoprotein HCMV UL141, thereby disrupting TRAIL death receptor signaling, thus mitigating viral activity.

Indexed as

CytomegalovirusGlycoproteinsReceptors, TNF-Related Apoptosis-Inducing LigandViral ProteinsHumansProtein BindingGlycoproteinsReceptors, TNF-Related Apoptosis-Inducing LigandTNFRSF10B protein, humanViral Proteinscell surface TNF receptorFMO pair interaction energyglycomimeticHCMV UL141iminosugarimmune evasionin silico analysismolecular dockingprotein-protein interactionviral protein antagonist

Identifiers

PMID40216247
PMCPMC12140054

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.