Evidence map›Paper›PMID 40215226›Full record

ArticlePLoS genetics2025

YebC2 resolves ribosome stalling and increases fitness of cells lacking EF-P and the ABCF ATPase YfmR.

Hye-Rim Hong, Cassidy R Prince, Letian Wu, Isabella N Lin, Katrina Callan, Heather A Feaga

Abstract read
In one paragraph

Article in PLoS genetics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Translation factors that keep the ribosome Pro-active.Microbiology and molecular biology reviews : MMBR · 2026
    Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Pleiotropic roles of elongation factor P inMicrobiology spectrum · 2026
    Article
  8. Article
  9. Review
  10. Structural Basis of TACO1-Mediated Efficient Mitochondrial Translation.bioRxiv : the preprint server for biology · 2025
    Article
  11. Article
  12. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors.

Hye-Rim HongDepartment of Microbiology, Cornell University, Ithaca, New York, United States of America.ORCID https://orcid.org/0000-0002-8339-3190
Cassidy R PrinceDepartment of Microbiology, Cornell University, Ithaca, New York, United States of America.ORCID https://orcid.org/0000-0003-2740-522X
Letian WuDepartment of Microbiology, Cornell University, Ithaca, New York, United States of America.ORCID https://orcid.org/0009-0005-9029-3840
Isabella N LinDepartment of Microbiology, Cornell University, Ithaca, New York, United States of America.ORCID https://orcid.org/0009-0003-9491-1971
Katrina CallanDepartment of Microbiology, Cornell University, Ithaca, New York, United States of America.ORCID https://orcid.org/0009-0007-9941-8835
Heather A FeagaDepartment of Microbiology, Cornell University, Ithaca, New York, United States of America.ORCID https://orcid.org/0009-0007-3190-5135

Funding

Ribosome Quality Control Mechanisms in Gram-Positive BacteriaR35GM147049 · NIGMS · CORNELL UNIVERSITY · PI Heather Feaga · 2022 to 2026
$1.9M
NIGMS NIH HHS R35 GM147049
6 · The paper itself

Abstract

Ribosome stalling is a major source of cellular stress. Therefore, many specialized elongation factors help prevent ribosome stalling. One of the best characterized of these factors is EF-P, which prevents ribosome stalling at polyproline tracts and other difficult-to-translate sequences. Recent evidence suggests that other factors also facilitate translation of polyproline motifs. For example, YfmR was recently identified as a protein that prevents ribosome stalling at proline-containing sequences in the absence of EF-P. Here, we show that YebC2 (formerly YeeI) functions as a translation factor in Bacillus subtilis that resolves ribosome stalling at polyprolines. YebC2 associates with the ribosome, supporting a direct role for YebC2 in translation. Moreover, YebC2 can reduce ribosome stalling and support cellular fitness in the absence of EF-P and YfmR. Finally, we present evidence that YebC2 is evolutionarily distinct from previously characterized YebC-family transcription factors and demonstrate that these paralogs have distinct physiological roles in B. subtilis. Altogether our work identifies YebC2 as a translation factor that resolves ribosome stalling in B. subtilis and provides crucial insight into the relationship between YebC2, EF-P, and YfmR, three factors that prevent ribosome stalling at polyprolines.

Indexed as

Adenosine TriphosphatasesBacillus subtilisBacterial ProteinsPeptide Elongation FactorsRibosomesPeptidesProtein BiosynthesisTranscription FactorsAdenosine TriphosphatasesBacterial Proteinsfactor EF-PPeptide Elongation FactorsPeptidespolyprolineTranscription Factors

Identifiers

PMID40215226
PMCPMC11990639

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.