Evidence map›Paper›PMID 40214613›Full record

ArticleInternational journal of cancer2025

A strategy for multimodal integration of transcriptomics, proteomics, and radiomics data for the prediction of recurrence in patients with IDH-mutant gliomas.

Tiffanie Chouleur, Christèle Etchegaray, Laura Villain, Antoine Lesur, Thomas Ferté, Marco Rossi, Laetitia Andrique, Costanza Simoncini, Anne-Sophie Giacobbi, Matteo Gambaretti and 9 more

Abstract read
In one paragraph

Article in International journal of cancer, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Review
  5. Ultra-Fast IntraoperativeInternational journal of molecular sciences · 2025
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Tiffanie ChouleurINSERM U1312 BRIC, University of Bordeaux, Pessac, France.
Christèle EtchegarayINRIA, University of Bordeaux Inria Monc, IMB, UMR 5251, Talence, France.
Laura VillainINSERM Bordeaux Population Health Research Center, SISTM team, UMR 1219, University of Bordeaux, Bordeaux, France.
Antoine LesurLuxembourg Institute of Health, Strassen, Luxembourg.
Thomas FertéINSERM Bordeaux Population Health Research Center, SISTM team, UMR 1219, University of Bordeaux, Bordeaux, France.
Marco RossiNeurosurgical Oncology Unit, Department of Medical Biotechnology and Translational Medicine, IRCCS Galeazzi Sant'Ambrogio, Milano, Italy.
Laetitia AndriqueINSERM U1312 BRIC, University of Bordeaux, Pessac, France.
Costanza SimonciniINRIA, University of Bordeaux Inria Monc, IMB, UMR 5251, Talence, France.
Anne-Sophie GiacobbiLaboratoire de Biologie Computationnelle et Quantitative (LCQB), UMR 7238 CNRS, Université Sorbonne, Paris, France.
Matteo GambarettiDepartment of Oncology and Hemato-Oncology, Neurosurgical Oncology Unit, Università degli Studi di Milano and IRCCS Galeazzi Sant'Ambrogio, Milano, Italy.
Egesta LopciNuclear Medicine Unit, Humanitas Research Hospital, Milano, Italy.
Bethania FernadesPathology Unit, Humanitas Research Hospital, Milano, Italy.
Gunnar DittmarLuxembourg Institute of Health, Strassen, Luxembourg.
Rolf BjerkvigDepartment of Biomedicine and KG Jebsen Brain Tumor Research Center, University of Bergen, Bergen, Norway.
Boris HejblumINSERM Bordeaux Population Health Research Center, SISTM team, UMR 1219, University of Bordeaux, Bordeaux, France.
Rodolphe ThiébautINSERM Bordeaux Population Health Research Center, SISTM team, UMR 1219, University of Bordeaux, Bordeaux, France.
Olivier SautINRIA, University of Bordeaux Inria Monc, IMB, UMR 5251, Talence, France.
Lorenzo BelloDepartment of Oncology and Hemato-Oncology, Neurosurgical Oncology Unit, Università degli Studi di Milano and IRCCS Galeazzi Sant'Ambrogio, Milano, Italy.
Andreas BikfalviINSERM U1312 BRIC, University of Bordeaux, Pessac, France.ORCID 0000-0003-4138-5229

Funding

ERA-NET GliomaPRD; TRANSCAN Joint Transnational Call 2016, Association pour la Recherche sur le Cancer, MOH, Lombardy Foundation for Biomedical Research (FRRB), NCS/RCN)University Bordeaux
6 · The paper itself

Abstract

Isocitrate dehydrogenase-mutant gliomas are lethal brain cancers that impair quality of life in young adults. Although less aggressive than glioblastomas, IDH-mutant gliomas invariably progress to incurable disease with unpredictable recurrence. A better classification of patient risk of recurrence is needed. Here, we describe a multimodal analytical pipeline integrating imaging, transcriptomic, and proteomic profiles using machine learning to improve patient stratification with novel signatures of patient risk of recurrence based on gene expression, protein level, and imaging. Additionally, we describe the biological characteristics of IDH-mutant glioma subtypes categorized by positron emission tomography (PET) and histology, and we reinforce the integration of positron emission tomography (PET) metrics in the classification of IDH-mutant gliomas. We identify a gene signature (KRT19, RUNX3, and SCRT2) and a protein signature (ATXN10, EIF4H, ITGAV, and NCAM1) associated with an increased risk of early recurrence. Furthermore, we integrated these markers with imaging-derived features, obtaining a better stratification of IDH-mutant glioma patients in comparison to histomolecular classification alone.

Indexed as

Brain NeoplasmsGliomaIsocitrate DehydrogenaseNeoplasm Recurrence, LocalAdultBiomarkers, TumorFemaleGene Expression ProfilingHumansMaleMiddle AgedMutationPositron-Emission TomographyPrognosisProteomicsRadiomicsBiomarkers, TumorIsocitrate DehydrogenaseIDH‐mutant gliomamultimodal integrationproteomicradiomictranscriptomic

Identifiers

PMID40214613
PMCPMC12141979

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.