Evidence map›Paper›PMID 40211555›Full record

ArticleJournal of clinical research in pediatric endocrinology2025

Diagnostic Utility of Next-Generation Sequencing-based CNV Analysis in Eleven Patients with Peters-Plus Syndrome: A Single-Center Experience

Akçahan Akalın, Enise Avcı Durmuşalioğlu, Şervan Özkalkak, Ruken Yıldırım, Veysel Öz, Edip Ünal, Leyla Hazar, Türkan Turkut Tan, Yusuf Can Doğan, Tahir Atik and 2 more

Abstract read
In one paragraph

Article in Journal of clinical research in pediatric endocrinology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Akçahan AkalınDiyarbakır Children’s Hospital, Clinic of Pediatric Genetics, Diyarbakır, TürkiyeORCID 0000-0001-9770-284X
Enise Avcı DurmuşalioğluEge University Faculty of Medicine, Department of Pediatrics, Division of Pediatric Genetics, İzmir, TürkiyeORCID 0000-0002-0582-8881
Şervan ÖzkalkakDiyarbakır Children’s Hospital, Clinic of Pediatric Endocrinology, Diyarbakır, TürkiyeORCID 0000-0002-1557-6040
Ruken YıldırımDiyarbakır Children’s Hospital, Clinic of Pediatric Endocrinology, Diyarbakır, TürkiyeORCID 0000-0002-9558-3856
Veysel ÖzDiyarbakır Children’s Hospital, Clinic of Pediatric Neurology, Diyarbakır, TürkiyeORCID 0000-0002-7619-9365
Edip ÜnalDicle University Faculty of Medicine, Department of Pediatric Endocrinology, Diyarbakır, TürkiyeORCID 0000-0002-9809-0977
Leyla HazarDicle University Faculty of Medicine, Department of Ophthalmology, Diyarbakır, TürkiyeORCID 0000-0002-8206-781X
Türkan Turkut TanEge University Faculty of Medicine, Department of Pediatrics, Division of Pediatric Genetics, İzmir, TürkiyeORCID 0009-0005-6914-7857
Yusuf Can DoğanEge University Faculty of Medicine, Department of Pediatrics, Division of Pediatric Genetics, İzmir, TürkiyeORCID 0009-0004-6917-8090
Tahir AtikEge University Faculty of Medicine, Department of Pediatrics, Division of Pediatric Genetics, İzmir, TürkiyeORCID 0000-0002-1142-3872
Özgür ÇoğuluEge University Faculty of Medicine, Department of Pediatrics, Division of Pediatric Genetics, İzmir, TürkiyeORCID 0000-0002-9037-5599
Esra IşıkEge University Faculty of Medicine, Department of Pediatrics, Division of Pediatric Genetics, İzmir, TürkiyeORCID 0000-0003-0657-2408

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Objective: Peters-Plus syndrome (PTRPLS) is an autosomal recessive congenital disorder of glycosylation caused by biallelic pathogenic variants in the ß 1,3-glucosyltransferase gene ( Methods: The study included eleven patients from six consanguineous families originating from the same village. Clinical exome sequencing-based CNV analysis was employed across all probands to ascertain the genetic background. Results: Using GATK-gCNV, we identified a homozygous deletion on chromosome 13q12.3, encompassing the fifteenth exon of the Conclusion: Our findings highlight an important role for Next-Generation Sequencing (NGS)-based CNV analysis in improving the diagnostic accuracy in PTRPLS. CNVs represent a significant form of genomic variation and should be systematically considered in genetically unresolved Mendelian disorders. Integrating CNV detection algorithms into routine NGS diagnostic workflows has the potential to enhance the identification of pathogenic changes, ultimately facilitating a more comprehensive molecular diagnosis for affected individuals.

Indexed as

Abnormalities, MultipleCongenital Disorders of GlycosylationCorneal OpacityDNA Copy Number VariationsEye AbnormalitiesGlucosyltransferasesHigh-Throughput Nucleotide SequencingLimb Deformities, CongenitalAdolescentAdultAnterior Eye SegmentChildChild, PreschoolFemaleGalactosyltransferasesHumansB3GLCT protein, humanGalactosyltransferasesGlucosyltransferasescopy number variationMendelian disordersnext-generation sequencingPeters-Plus syndrome

Identifiers

PMID40211555
PMCPMC12699094

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.