Evidence map›Paper›PMID 40211134›Full record

ArticleBMC genomics2025

Host transcriptome response to Mycoplasma bovis and bovine viral diarrhea virus in bovine tissues.

Anna K Goldkamp, Randy G Atchison, Shollie M Falkenberg, Rohana P Dassanayake, John D Neill, Eduardo Casas

Abstract read
In one paragraph

Article in BMC genomics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Anna K GoldkampRuminant Diseases and Immunology Research Unit, National Animal Disease Center, Agricultural Research Service, Department of Agriculture, Ames, IA, USA.
Randy G AtchisonRuminant Diseases and Immunology Research Unit, National Animal Disease Center, Agricultural Research Service, Department of Agriculture, Ames, IA, USA.
Shollie M FalkenbergRuminant Diseases and Immunology Research Unit, National Animal Disease Center, Agricultural Research Service, Department of Agriculture, Ames, IA, USA.
Rohana P DassanayakeRuminant Diseases and Immunology Research Unit, National Animal Disease Center, Agricultural Research Service, Department of Agriculture, Ames, IA, USA.
John D Neill *Ruminant Diseases and Immunology Research Unit, National Animal Disease Center, Agricultural Research Service, Department of Agriculture, Ames, IA, USA.
Eduardo CasasRuminant Diseases and Immunology Research Unit, National Animal Disease Center, Agricultural Research Service, Department of Agriculture, Ames, IA, USA. Eduardo.casas@usda.gov.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundMycoplasma bovis is a prominent pathogen associated with respiratory disease in livestock. Respiratory disease in cattle often involves co-infection, where a primary viral infection can weaken the host immune system and thus enhance subsequent bacterial infection. The objective of this study was to investigate changes in the host (cattle) transcriptome during bacterial-viral co-infection. RNA sequencing was done in whole blood cells (WBC), liver, mesenteric lymph node (MLN), tracheal-bronchial lymph node (TBLN), spleen, and thymus collected from Control animals (n = 2), animals infected with M. bovis (MB; n = 3), and animals infected with M. bovis and bovine viral diarrhea virus (BVDV) (Dual; n = 3).

resultsThymus and spleen had the greatest number of differentially expressed genes (DEGs) out of all tissues analyzed. In spleen, genes involved in maintenance of the extracellular matrix (ECM) including collagen type XV alpha 1 chain (COL15A1), collagen type IV alpha 2 chain (COL4A2), and heparan sulfate proteoglycan 2 (HSPG2) were the most significantly downregulated in Dual compared to Control and MB. In thymus, complement 3 (C3) was a highly significant DEG and upregulated in Dual compared to Control and MB. Interferon alpha inducible protein 6 (IFI6) and interferon-induced transmembrane proteins (IFITM1 and IFITM3), were significantly associated with infection status and upregulated in spleen and thymus of Dual compared to Control and MB.

conclusionDownregulation of ECM components may cause degradation of the ECM and contribute to increased viral spread due to co-infection. Hyperactivation of complement pathway genes may contribute to damage to the thymus and influence severity of co-infection. Co-expression of IFI6, IFITM1 and IFITM3 across lymphoid tissues may be connected to enhanced pathogenesis in co-infection. These findings suggest co-infection exacerbates disease severity through modulation of ECM components in spleen and complement and coagulation cascades in the thymus. These impacted pathways may underlie thymic atrophy and impaired pathogen clearance due to BVDV and M. bovis co-infection.

Indexed as

CoinfectionDiarrhea Viruses, Bovine ViralHost-Pathogen InteractionsMycoplasma bovisMycoplasma InfectionsTranscriptomeAnimalsCattleGene Expression ProfilingBovineBovine viral diarrhea virusGene expressionMycoplasma bovis

Identifiers

PMID40211134
PMCPMC11987210

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.