Evidence map›Paper›PMID 40208794›Full record

ArticleCell reports2025

Activity-dependent synthesis of Emerin gates neuronal plasticity by regulating proteostasis.

Yi Xie, Ruoxi Wang, Daniel B McClatchy, Yuanhui Ma, Jolene Diedrich, Manuel Sanchez-Alavez, Michael Petrascheck, John R Yates, Hollis T Cline

Abstract read
In one paragraph

Article in Cell reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors.

Yi XieDepartment of Neuroscience and Dorris Neuroscience Center, The Scripps Research Institute, La Jolla, CA 92037, USA; Skaggs Graduate Program, The Scripps Research Institute, La Jolla, CA 92037, USA.
Ruoxi WangDepartment of Neuroscience and Dorris Neuroscience Center, The Scripps Research Institute, La Jolla, CA 92037, USA.
Daniel B McClatchyDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, CA 92037, USA.
Yuanhui MaDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, CA 92037, USA.
Jolene DiedrichDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, CA 92037, USA.
Manuel Sanchez-AlavezDepartment of Molecular and Cellular Biology, The Scripps Research Institute, La Jolla, CA 92037, USA.
Michael PetrascheckDepartment of Molecular and Cellular Biology, The Scripps Research Institute, La Jolla, CA 92037, USA.
John R YatesDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, CA 92037, USA.
Hollis T ClineDepartment of Neuroscience and Dorris Neuroscience Center, The Scripps Research Institute, La Jolla, CA 92037, USA. Electronic address: cline@scripps.edu.

Funding

TrainingP41GM103533 · NIGMS · UNIVERSITY OF WASHINGTON · PI DAVIS, TRISHA N. · 2012 to 2021
$20.7M
Quantitative Proteome Analysis of Brain DevelopmentR01MH067880 · NIMH · SCRIPPS RESEARCH INSTITUTE, THE · PI YATES III, JOHN R · 2003 to 2017
$7.1M
Cell Specific Perturbations of the Proteome in Alzheimer's DiseaseR01AG075862 · NIA · SCRIPPS RESEARCH INSTITUTE, THE · PI MAXIMOV, ANTON, PETRASCHECK, MICHAEL · 2021 to 2025
$6.6M
Lowering Mitochondrial ATP Synthase Activity Slows Aging and Alzheimer's DiseaseR01AG067331 · NIA · SCRIPPS RESEARCH INSTITUTE, THE · PI PETRASCHECK, MICHAEL · 2020 to 2024
$4.9M
Using geroscience to understand and treat Alzheimer's diseaseR01AG069206 · NIA · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI MAHER, PAMELA ANNE · 2020 to 2024
$4.0M
Experience-dependent Cellular Plasticity MechanismsR01EY031597 · NEI · SCRIPPS RESEARCH INSTITUTE, THE · PI CLINE, HOLLIS T. · 2021 to 2025
$3.6M
Activation of Neuronal Degradative Pathways to Ameliorate Prion DiseaseR56NS131648 · NINDS · SCRIPPS RESEARCH INSTITUTE, THE · PI ENCALADA, SANDRA E, PETRASCHECK, MICHAEL · 2023 to 2023
$872k
NEI NIH HHS R01 EY031597NIA NIH HHS R01 AG067331NIA NIH HHS R01 AG069206NIA NIH HHS R01 AG075862NIGMS NIH HHS P41 GM103533NIMH NIH HHS R01 MH067880NINDS NIH HHS R56 NS131648
6 · The paper itself

Abstract

Neurons dynamically regulate their proteome in response to sensory input, a key process underlying experience-dependent plasticity. We characterized the visual experience-dependent nascent proteome in mice within a brief, defined time window after stimulation using an optimized metabolic labeling approach. Visual experience induced cell-type-specific and age-dependent alterations in the nascent proteome, including proteostasis-related proteins. Emerin is the top activity-induced candidate plasticity protein. Activity-induced neuronal Emerin synthesis is rapid and transcription independent. Emerin broadly inhibits protein synthesis, decreasing translation regulators and synaptic proteins. Decreasing Emerin shifted the dendritic spine population from a predominantly mushroom morphology to filopodia and decreased network connectivity. Blocking visual experience-induced Emerin reduced visually evoked electrophysiological responses and impaired behaviorally assessed visual information processing. Our findings support a proteostatic model in which visual experience-induced Emerin provides a feedforward block on further protein synthesis, refining temporal control of activity-induced plasticity proteins and optimizing visual system function.

Indexed as

Membrane ProteinsNeuronal PlasticityNeuronsProteostasisAnimalsDendritic SpinesMaleMiceMice, Inbred C57BLProtein BiosynthesisProteomeMembrane ProteinsProteomecell-type-specific proteomicsCP: Molecular biologyCP: NeuroscienceEmerinmetabolic protein labelingprotein synthesisproteostasissensory experience-dependent plasticitysynaptic plasticityvisual depth perceptionvisual response

Identifiers

PMID40208794
PMCPMC12080591

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.