ArticleNature2025
Connectomics of predicted Sst transcriptomic types in mouse visual cortex.
Abstract read
In one paragraph
Article in Nature, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.
0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
12 citing papers in PubMed.
- Highly energy-efficient information-handling dynamics of the brain.National science review · 2026Article
- Article
- Cell-type-specific parallel pathways in the canonical cortical microcircuit.bioRxiv : the preprint server for biology · 2026Article
- vEMRec: High-Resolution Volume Electron Microscopy Reconstruction Based on Structure-Preserving and High-Fidelity 3D Alignment.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026Article
- Brain-inspired energy efficient technologies for next-generation artificial intelligence.Biological cybernetics · 2026Review
- The grand challenge in cellular neurophysiology.Frontiers in cellular neuroscience · 2026Article
- Article
- Review
- The synaptic architecture of layer 5 thick tufted excitatory neurons in mouse visual cortex.Nature neuroscience · 2025Article
- Article
- Article
- Structure-function relationships across scales: implications for atlases.Frontiers in neuroscience · 2025Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
51 authors.
Clare R GamlinAllen Institute for Brain Science, Seattle, WA, USA.
Casey M Schneider-MizellAllen Institute for Brain Science, Seattle, WA, USA.ORCID 0000-0001-9477-3853
Matthew MalloryAllen Institute for Brain Science, Seattle, WA, USA.
Leila ElabbadyAllen Institute for Brain Science, Seattle, WA, USA.
Nathan GouwensAllen Institute for Brain Science, Seattle, WA, USA.ORCID 0000-0001-8429-4090
Grace WilliamsAllen Institute for Brain Science, Seattle, WA, USA.
Alice MukoraAllen Institute for Brain Science, Seattle, WA, USA.
Rachel DalleyAllen Institute for Brain Science, Seattle, WA, USA.ORCID 0000-0001-7461-7845
Agnes L BodorAllen Institute for Brain Science, Seattle, WA, USA.
Derrick BrittainAllen Institute for Brain Science, Seattle, WA, USA.
JoAnn BuchananAllen Institute for Brain Science, Seattle, WA, USA.ORCID 0000-0002-4212-5560
Daniel J BumbargerAllen Institute for Brain Science, Seattle, WA, USA.
Emily JoyceAllen Institute for Brain Science, Seattle, WA, USA.
Daniel KapnerAllen Institute for Brain Science, Seattle, WA, USA.
Sam KinnAllen Institute for Brain Science, Seattle, WA, USA.
Gayathri MahalingamAllen Institute for Brain Science, Seattle, WA, USA.ORCID 0000-0003-3718-5013
Sharmishtaa SeshamaniAllen Institute for Brain Science, Seattle, WA, USA.
Marc TakenoAllen Institute for Brain Science, Seattle, WA, USA.ORCID 0000-0002-8384-7500
Russel TorresAllen Institute for Brain Science, Seattle, WA, USA.ORCID 0000-0002-2876-4382
Wenjing YinAllen Institute for Brain Science, Seattle, WA, USA.
Philip R NicovichAllen Institute for Brain Science, Seattle, WA, USA.
J Alexander BaePrinceton Neuroscience Institute, Princeton University, Princeton, NJ, USA.ORCID 0000-0002-4681-6342
Manuel A CastroPrinceton Neuroscience Institute, Princeton University, Princeton, NJ, USA.
Sven DorkenwaldPrinceton Neuroscience Institute, Princeton University, Princeton, NJ, USA.
Akhilesh HalageriPrinceton Neuroscience Institute, Princeton University, Princeton, NJ, USA.
Zhen JiaPrinceton Neuroscience Institute, Princeton University, Princeton, NJ, USA.
Chris JordanPrinceton Neuroscience Institute, Princeton University, Princeton, NJ, USA.
Nico KemnitzPrinceton Neuroscience Institute, Princeton University, Princeton, NJ, USA.ORCID 0000-0002-0260-4532
Kisuk LeePrinceton Neuroscience Institute, Princeton University, Princeton, NJ, USA.
Kai LiComputer Science Department, Princeton University, Princeton, NJ, USA.ORCID 0000-0002-2095-7024
Ran LuPrinceton Neuroscience Institute, Princeton University, Princeton, NJ, USA.
Thomas MacrinaPrinceton Neuroscience Institute, Princeton University, Princeton, NJ, USA.ORCID 0000-0002-0622-9338
Eric MitchellPrinceton Neuroscience Institute, Princeton University, Princeton, NJ, USA.ORCID 0000-0002-7487-1744
Shanka Subhra MondalPrinceton Neuroscience Institute, Princeton University, Princeton, NJ, USA.ORCID 0000-0003-1252-0129
Shang MuPrinceton Neuroscience Institute, Princeton University, Princeton, NJ, USA.
Barak NehoranPrinceton Neuroscience Institute, Princeton University, Princeton, NJ, USA.ORCID 0000-0001-7371-0829
Sergiy PopovychPrinceton Neuroscience Institute, Princeton University, Princeton, NJ, USA.
William SilversmithPrinceton Neuroscience Institute, Princeton University, Princeton, NJ, USA.
Nicholas L TurnerPrinceton Neuroscience Institute, Princeton University, Princeton, NJ, USA.
William WongPrinceton Neuroscience Institute, Princeton University, Princeton, NJ, USA.
Jingpeng WuPrinceton Neuroscience Institute, Princeton University, Princeton, NJ, USA.
Szi-Chieh YuPrinceton Neuroscience Institute, Princeton University, Princeton, NJ, USA.ORCID 0009-0001-9684-0156
Jim BergAllen Institute for Brain Science, Seattle, WA, USA.
Tim JarskyAllen Institute for Brain Science, Seattle, WA, USA.ORCID 0000-0002-4399-539X
Brian LeeAllen Institute for Brain Science, Seattle, WA, USA.
H Sebastian SeungPrinceton Neuroscience Institute, Princeton University, Princeton, NJ, USA.ORCID 0000-0002-8591-6733
Hongkui ZengAllen Institute for Brain Science, Seattle, WA, USA.ORCID 0000-0002-0326-5878
R Clay ReidAllen Institute for Brain Science, Seattle, WA, USA.ORCID 0000-0002-8697-6797
Forrest CollmanAllen Institute for Brain Science, Seattle, WA, USA. forrestc@alleninstitute.org.ORCID 0000-0002-0280-7022
Nuno Maçarico da CostaAllen Institute for Brain Science, Seattle, WA, USA. nunod@alleninstitute.org.ORCID 0000-0003-2001-4568
Staci A SorensenAllen Institute for Brain Science, Seattle, WA, USA. stacis@alleninstitute.org.ORCID 0000-0002-6799-2126
Funding
Establishing a Comprehensive and Standardized Cell Type Characterization PlatformU01MH105982 · NIMH · ALLEN INSTITUTE · PI ANDERSON, DAVID J, ZENG, HONGKUI · 2014 to 2016
$5.1MHigh-throughput robotic analysis of integrated neuronal phenotypesR01EY023173 · NEI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI BOYDEN, EDWARD S., FOREST, CRAIG · 2012 to 2016
$4.3MFrom synapses to genes through morphology: an integrated characterization of cell types based on connectomics and transcriptomics dataRF1MH125932 · NIMH · ALLEN INSTITUTE · PI COLLMAN, FORREST CHRISTIE, MACARICO DA COSTA, NUNO · 2021 to 2021
$1.4MNEI NIH HHS R01 EY023173NIMH NIH HHS RF1 MH125932NIMH NIH HHS U01 MH105982
Abstract
Neural circuit function is shaped both by the cell types that comprise the circuit and the connections between them
Indexed as
ConnectomeSomatostatinTranscriptomeVisual CortexAnimalsAxonsFemaleMaleMiceMice, Inbred C57BLMyelin SheathNeuronsSynapsesSomatostatin
Identifiers
What OpenQuestion holds
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LicenceCC BY-NC-ND
Read underepoch 390
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.