Evidence map›Paper›PMID 40204842›Full record

ArticleScientific reports2025

A paper-based loop-mediated isothermal amplification assay for highly pathogenic avian influenza.

Mohamed Kamel, Josiah Levi Davidson, Jenna M Schober, Gregory S Fraley, Mohit S Verma

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. A Dual-Gene Colorimetric LAMP Assay for Genus-Level Detection ofInternational journal of molecular sciences · 2025
    Article
  8. Review
  9. The emergence of highly pathogenic avian influenza H5N1 in dairy cattle: implications for public health, animal health, and pandemic preparedness.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2025
    Review
  10. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Mohamed KamelDepartment of Agricultural and Biological Engineering, Purdue University, West Lafayette, IN, 47907, USA.
Josiah Levi DavidsonDepartment of Agricultural and Biological Engineering, Purdue University, West Lafayette, IN, 47907, USA.
Jenna M SchoberDepartment of Animal Sciences, Purdue University, West Lafayette, IN, 47907-2050, USA.
Gregory S FraleyDepartment of Animal Sciences, Purdue University, West Lafayette, IN, 47907-2050, USA.
Mohit S VermaDepartment of Agricultural and Biological Engineering, Purdue University, West Lafayette, IN, 47907, USA. msverma@purdue.edu.

Funding

Quality Assurance and Quality Control Project Management: Improving Submissions and Study Conduct in the Human Subjects Research Prior Approval ProcessUL1TR002529 · NCATS · INDIANA UNIVERSITY INDIANAPOLIS · PI MOE, SHARON M, WIEHE, SARAH ELIZABETH · 2018 to 2022
$27.2M
Foundation for Food and Agriculture Research FF-NIA20-0000000087NCATS NIH HHS UL1 TR002529NCATS NIH HHS UL1TR002529
6 · The paper itself

Abstract

Avian influenza outbreaks have had significant economic and public health consequences worldwide. Therefore, prompt, reliable, and cost-effective diagnostic devices are crucial for scrutinizing and confining highly pathogenic avian influenza viruses (HPAIVs). Our study introduced and evaluated a novel paper-based loop-mediated isothermal amplification (LAMP) test for diagnosing the H5 subtype of the avian influenza virus (AIV). We meticulously designed and screened LAMP primers targeting the H5-haemagglutinin (H5-HA) gene of AIV and fine-tuned the paper-based detection assay for best performance. The paper-based LAMP assay demonstrated a detection limit of 500 copies per reaction (25 copies/µl). Additionally, the assay exhibited no cross-reactivity with common bovine and avian pathogens, confirming its specificity. Spiking experiments revealed that the assay could accurately detect 1000 copies of synthetic HPAIV RNA (per reaction) when spiked into oropharyngeal swab samples, achieving 100% analytical sensitivity, specificity, and accuracy. This inexpensive, user-friendly point-of-need diagnostic tool holds great promise, especially in resource-limited settings. It only requires a water bath for incubation and enables visual detection of results without special equipment. Overall, the paper-based LAMP assay provides a promising method for rapidly and reliably detecting the H5 subtype of AIV, contributing to improved surveillance and early intervention strategies.

Indexed as

Influenza A virusInfluenza A Virus, H5N1 SubtypeInfluenza in BirdsMolecular Diagnostic TechniquesNucleic Acid Amplification TechniquesPaperAnimalsBirdsHemagglutinin Glycoproteins, Influenza VirusLimit of DetectionSensitivity and SpecificityHemagglutinin Glycoproteins, Influenza VirusDiagnosticsInfluenza A virusesLoop-mediated isothermal amplificationMicrofluidic paper-based analytical devicesPoint-of-careµPADs

Identifiers

PMID40204842
PMCPMC11982278

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.