Evidence map›Paper›PMID 40203097›Full record

ArticleScience advances2025

Identifying and controlling inactive and active conformations of a serine protease.

Eunjeong Lee, Norman Tran, Jasmina S Redzic, Harmanpreet Singh, Lorena Alamillo, Todd Holyoak, Donald Hamelberg, Elan Zohar Eisenmesser

Abstract read
In one paragraph

Article in Science advances, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Eunjeong LeeDepartment of Biochemistry and Molecular Genetics, University of Colorado School of Medicine, Aurora, CO 80045, USA.ORCID 0000-0003-0560-2943
Norman TranDepartment of Biology, University of Waterloo, Waterloo, ON N2L 3G1, Canada.
Jasmina S RedzicDepartment of Biochemistry and Molecular Genetics, University of Colorado School of Medicine, Aurora, CO 80045, USA.
Harmanpreet SinghDepartment of Chemistry, Georgia State University, Atlanta, GA 30302-3965, USA.ORCID 0000-0002-2093-2468
Lorena AlamilloDepartment of Biochemistry and Molecular Genetics, University of Colorado School of Medicine, Aurora, CO 80045, USA.ORCID 0000-0002-2622-0277
Todd HolyoakDepartment of Biology, University of Waterloo, Waterloo, ON N2L 3G1, Canada.ORCID 0000-0002-7329-1115
Donald HamelbergDepartment of Chemistry, Georgia State University, Atlanta, GA 30302-3965, USA.ORCID 0000-0002-3785-3037
Elan Zohar EisenmesserDepartment of Biochemistry and Molecular Genetics, University of Colorado School of Medicine, Aurora, CO 80045, USA.ORCID 0000-0002-6967-0892

Funding

Developing computational tools to complement experiments in understanding biomolecular function from conformational ensemblesR35GM153718 · NIGMS · GEORGIA STATE UNIVERSITY · PI Donald Hamelberg · 2024 to 2026
$1.2M
NIGMS NIH HHS R35 GM153718
6 · The paper itself

Abstract

Serine proteases have been proposed to dynamically sample inactive and active conformations, but direct evidence at atomic resolution has remained elusive. Using nuclear magnetic resonance (NMR), we identified a single residue, D164, in exfoliative toxin A (ETA) that acts as a molecular "switch" to regulate global dynamic sampling. Mutations at this site shift the balance between inactive and active states, correlating directly with catalytic activity. Beyond identifying this dynamic switch, we demonstrate how it works in concert with other allosterically coupled sites to rationally control enzyme movements and catalytic function. This study provides a framework for linking conformational dynamics to function and paves the way for engineering enzymes, in particular, proteases, with tailored activities for applications in medicine and biotechnology.

Indexed as

Serine ProteasesCatalytic DomainModels, MolecularMutationProtein ConformationSerine Proteases

Identifiers

PMID40203097
PMCPMC11980832

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.