Evidence map›Paper›PMID 40202775›Full record

ArticleChembiochem : a European journal of chemical biology2025

An Indole Dearomatization Strategy for the Synthesis of Pseudo-Natural Products.

Joseph G F Hoock, Annina Burhop, Luca C Greiner, Beate Schölermann, Celine Da Cruz Lopes Guita, Jie Liu, Sukdev Bag, Axel Pahl, Sonja Sievers, Rebecca Scheel and 4 more

Abstract read
In one paragraph

Article in Chembiochem : a European journal of chemical biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Joseph G F HoockDepartment of Chemical Biology, Max Planck Institute of Molecular Physiology, 44227, Dortmund, Germany.
Annina BurhopDepartment of Chemical Biology, Max Planck Institute of Molecular Physiology, 44227, Dortmund, Germany.
Luca C GreinerDepartment of Chemical Biology, Max Planck Institute of Molecular Physiology, 44227, Dortmund, Germany.
Beate SchölermannDepartment of Chemical Biology, Max Planck Institute of Molecular Physiology, 44227, Dortmund, Germany.
Celine Da Cruz Lopes GuitaDepartment of Chemical Biology, Max Planck Institute of Molecular Physiology, 44227, Dortmund, Germany.
Jie LiuDepartment of Chemical Biology, Max Planck Institute of Molecular Physiology, 44227, Dortmund, Germany.ORCID https://orcid.org/0000-0002-9455-325X
Sukdev BagDepartment of Chemical Biology, Max Planck Institute of Molecular Physiology, 44227, Dortmund, Germany.
Axel PahlCompound Management and Screening Center, 44227, Dortmund, Germany.ORCID https://orcid.org/0000-0003-2068-7543
Sonja SieversDepartment of Chemical Biology, Max Planck Institute of Molecular Physiology, 44227, Dortmund, Germany.ORCID https://orcid.org/0000-0003-0854-4507
Rebecca ScheelFaculty of Chemistry and Inorganic Chemistry, TU Dortmund University, 44227, Dortmund, Germany.
Carsten StrohmannFaculty of Chemistry and Inorganic Chemistry, TU Dortmund University, 44227, Dortmund, Germany.ORCID https://orcid.org/0000-0002-4787-2135
Slava ZieglerDepartment of Chemical Biology, Max Planck Institute of Molecular Physiology, 44227, Dortmund, Germany.ORCID https://orcid.org/0000-0003-4398-7741
Michael GrigalunasDepartment of Chemical Biology, Max Planck Institute of Molecular Physiology, 44227, Dortmund, Germany.ORCID https://orcid.org/0000-0003-0419-8168
Herbert WaldmannDepartment of Chemical Biology, Max Planck Institute of Molecular Physiology, 44227, Dortmund, Germany.ORCID https://orcid.org/0000-0002-9606-7247

Funding

Alexander von Humboldt Stiftungcompound management and screening centerEFPIA companiesEuropean Union (DHHD) EFRE-0200481European Union's Seventh Framework Programme FP7/2007-2013Innovative Medicines Initiative 115489Max-Planck-GesellschaftNetzwerke 2021
6 · The paper itself

Abstract

The indole moiety is a privileged fragment that frequently populates existing bioactive compound collections. The development of an indole-dearomatization sequence and its application for library expansion of a collection of indole-containing pseudo-natural products (NPs) are described. The resulting compounds are topologically distinct from the original compound class. Phenotyping by means of the cell painting assay initially indicates that the dearomatized compounds are morphologically different than the original pseudo-NP compound class and guiding NPs. However, analysis by means of a new subprofile analysis of the same cell painting assay data indicates that similar morphologies persist throughout the compound classes. Further biological studies support the findings of the subprofile analysis and highlight its potential to more effectively characterize novel compounds. The biological findings suggest that a plethora of indole-dearomatization reactions can be applied to existing indole-containing compound collections to rapidly access new biologically relevant scaffolds.

Indexed as

Biological ProductsIndolesHumansMolecular StructureBiological ProductsindoleIndolesfused ring systemsmorphological profilingpseudo‐natural productsreduction, heterocycles

Identifiers

PMID40202775
PMCPMC12118328

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.