Evidence map›Paper›PMID 40202735›Full record

ArticleInvestigative ophthalmology & visual science2025

Fecal Microbial Profiles and Short-Chain Fatty Acid/Bile Acid Metabolomics in Patients With Age-Related Macular Degeneration: A Pilot Study.

Zaid Parekh, Jason Xiao, Amir Mani, Quadis Evans, Christopher Phung, Hugo A Barba, Bingqing Xie, Ashley M Sidebottom, Anitha Sundararajan, Huaiying Lin and 9 more

Abstract read
In one paragraph

Article in Investigative ophthalmology & visual science, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Zaid ParekhPritzker School of Medicine, The University of Chicago, Chicago, Illinois, United States.
Jason XiaoPritzker School of Medicine, The University of Chicago, Chicago, Illinois, United States.
Amir ManiDepartment of Ophthalmology and Visual Science, The University of Chicago, Chicago, Illinois, United States.
Quadis EvansDepartment of Ophthalmology and Visual Science, The University of Chicago, Chicago, Illinois, United States.
Christopher PhungPritzker School of Medicine, The University of Chicago, Chicago, Illinois, United States.
Hugo A BarbaDepartment of Ophthalmology and Visual Science, The University of Chicago, Chicago, Illinois, United States.
Bingqing XieDepartment of Medicine, The University of Chicago, Chicago, Illinois, United States.
Ashley M SidebottomDuchossois Family Institute, The University of Chicago, Chicago, Illinois, United States.
Anitha SundararajanDuchossois Family Institute, The University of Chicago, Chicago, Illinois, United States.
Huaiying LinDuchossois Family Institute, The University of Chicago, Chicago, Illinois, United States.
Ramanujam RamaswamyDuchossois Family Institute, The University of Chicago, Chicago, Illinois, United States.
David DaoDepartment of Ophthalmology and Visual Science, The University of Chicago, Chicago, Illinois, United States.
Reem GonnahDepartment of Ophthalmology and Visual Science, The University of Chicago, Chicago, Illinois, United States.
Madeleine YehiaDepartment of Ophthalmology and Visual Science, The University of Chicago, Chicago, Illinois, United States.
Seenu M HariprasadDepartment of Ophthalmology and Visual Science, The University of Chicago, Chicago, Illinois, United States.
Mark D'SouzaDuchossois Family Institute, The University of Chicago, Chicago, Illinois, United States.
Dinanath SulakheDuchossois Family Institute, The University of Chicago, Chicago, Illinois, United States.
Eugene B ChangDepartment of Medicine, The University of Chicago, Chicago, Illinois, United States.
Dimitra SkondraDepartment of Ophthalmology and Visual Science, The University of Chicago, Chicago, Illinois, United States.

Funding

ULTRASTRUCTURE AND CYTOMORPHOLOGY COREP30DK042086 · NIDDK · UNIVERSITY OF CHICAGO · PI CHANG, EUGENE B · 1990 to 2025
$29.8M
NIDDK NIH HHS P30 DK042086
6 · The paper itself

Abstract

Purpose: Age-related macular degeneration (AMD) is a multifactorial disease, and studies have implicated the role of gut microbiota in its pathogenesis. However, characterization of microbiome dysbiosis and associated microbial-derived metabolomic profiles across AMD stages remains unknown. In this pilot study, we explored how gut microbiome composition and gut-derived metabolites differ in AMD. Methods: Our pilot study analyzed fasted stool samples that were collected from 22 patients at a tertiary academic center. Subjects were classified as control, intermediate AMD, or advanced AMD based on clinical presentation. 16S rRNA amplicon sequencing and standard chromatography-mass spectrometry methods were used to identify bacterial taxonomy composition and abundance of short-chain fatty acids (SCFAs) and bile acids (BAs), respectively. Genetic testing was used to investigate the frequency of 14 high-risk single nucleotide polymorphisms (SNPs) associated with AMD in the AMD cohort. Results: Forty-three differentially abundant genera were present among the control, intermediate, and advanced groups. Taxa with known roles in immunologic pathways, such as Desulfovibrionales (q = 0.10) and Terrisporobacter (q = 1.16e-03), were in greater abundance in advanced AMD patients compared to intermediate. Advanced AMD patients had decreased abundance of 12 SCFAs, including acetate (P = 0.002), butyrate (P = 0.04), and propionate (P = 0.01), along with 12 BAs, including taurocholic acid (P = 0.02) and tauroursodeoxycholic acid (P = 0.04). Frequencies of high-risk SNPs were not significantly different between the intermediate and advanced AMD groups. Conclusions: This pilot study identifies distinct gut microbiome compositions and metabolomic profiles associated with AMD and its stages, providing preliminary evidence of a potential link between gut microbiota and AMD pathogenesis. To validate these findings and elucidate the underlying mechanisms, future research with larger cohorts and more comprehensive sampling is strongly recommended.

Indexed as

Bile Acids and SaltsFatty Acids, VolatileFecesGastrointestinal MicrobiomeMacular DegenerationAgedAged, 80 and overBacteriaFemaleHumansMaleMetabolomicsMiddle AgedPilot ProjectsPolymorphism, Single NucleotideRNA, Ribosomal, 16SBile Acids and SaltsFatty Acids, VolatileRNA, Ribosomal, 16S

Identifiers

PMID40202735
PMCPMC11993127

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.