Evidence map›Paper›PMID 40199997›Full record

ArticleScientific reports2025

Phenogenomic resources immortalized in a panel of wild-derived strains of five species of house mice.

Jaroslav Piálek, Ľudovít Ďureje, Zuzana Hiadlovská, Jakub Kreisinger, Tatiana Aghová, Anna Bryjová, Dagmar Čížková, Joëlle Goüy de Bellocq, Helena Hejlová, Kateřina Janotová and 12 more

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Mouse X-linked microRNA cluster regulates the meiotic checkpoint andProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors.

Jaroslav PiálekStudenec Research Facility, Institute of Vertebrate Biology, Czech Academy of Sciences, Brno, Czech Republic. jpialek@ivb.cz.ORCID http://orcid.org/0000-0002-0829-7481
Ľudovít ĎurejeStudenec Research Facility, Institute of Vertebrate Biology, Czech Academy of Sciences, Brno, Czech Republic.ORCID http://orcid.org/0009-0000-9406-7377
Zuzana HiadlovskáInstitute of Animal Physiology and Genetics, Czech Academy of Sciences, Brno, Czech Republic.ORCID http://orcid.org/0000-0003-4730-4557
Jakub KreisingerDepartment of Zoology, Faculty of Science, Charles University, Prague, Czech Republic.ORCID http://orcid.org/0000-0001-9375-9814
Tatiana AghováStudenec Research Facility, Institute of Vertebrate Biology, Czech Academy of Sciences, Brno, Czech Republic.
Anna BryjováStudenec Research Facility, Institute of Vertebrate Biology, Czech Academy of Sciences, Brno, Czech Republic.
Dagmar ČížkováStudenec Research Facility, Institute of Vertebrate Biology, Czech Academy of Sciences, Brno, Czech Republic.ORCID http://orcid.org/0000-0001-5031-7792
Joëlle Goüy de BellocqStudenec Research Facility, Institute of Vertebrate Biology, Czech Academy of Sciences, Brno, Czech Republic.ORCID http://orcid.org/0000-0001-5831-6284
Helena HejlováStudenec Research Facility, Institute of Vertebrate Biology, Czech Academy of Sciences, Brno, Czech Republic.
Kateřina JanotováStudenec Research Facility, Institute of Vertebrate Biology, Czech Academy of Sciences, Brno, Czech Republic.
Iva MartincováStudenec Research Facility, Institute of Vertebrate Biology, Czech Academy of Sciences, Brno, Czech Republic.
Annie OrthMax-Planck Institute for Evolutionary Biology, Plön, Germany.
Jana PiálkováStudenec Research Facility, Institute of Vertebrate Biology, Czech Academy of Sciences, Brno, Czech Republic.
Iva PospíšilováStudenec Research Facility, Institute of Vertebrate Biology, Czech Academy of Sciences, Brno, Czech Republic.
Ludmila RouskováStudenec Research Facility, Institute of Vertebrate Biology, Czech Academy of Sciences, Brno, Czech Republic.
Barbora Vošlajerová BímováStudenec Research Facility, Institute of Vertebrate Biology, Czech Academy of Sciences, Brno, Czech Republic.ORCID http://orcid.org/0000-0002-8658-5112
Christine PfeifleMax-Planck Institute for Evolutionary Biology, Plön, Germany.
Diethard TautzMax-Planck Institute for Evolutionary Biology, Plön, Germany.ORCID http://orcid.org/0000-0002-0460-5344
François BonhommeISEM, CNRS, EPHE, IRD, Université de Montpellier, Montpellier, France.ORCID http://orcid.org/0000-0002-8792-9239
Jiří ForejtDivision BIOCEV, Institute of Molecular Genetics, Czech Academy of Sciences, Vestec, Czech Republic.ORCID http://orcid.org/0000-0002-2793-3623
Miloš MacholánInstitute of Animal Physiology and Genetics, Czech Academy of Sciences, Brno, Czech Republic.ORCID http://orcid.org/0000-0001-5663-6831
Pavla KlusáčkováStudenec Research Facility, Institute of Vertebrate Biology, Czech Academy of Sciences, Brno, Czech Republic.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The house mouse, Mus musculus, is a widely used animal model in biomedical research, with classical laboratory strains (CLS) being the most frequently employed. However, the limited genetic variability in CLS hinders their applicability in evolutionary studies. Wild-derived strains (WDS), on the other hand, provide a suitable resource for such investigations. This study quantifies genetic and phenotypic data of 101 WDS representing 5 species, 3 subspecies, and 8 natural Y consomic strains and compares them with CLS. Genetic variability was estimated using whole mtDNA sequences, the Prdm9 gene, and copy number variation at two sex chromosome-linked genes. WDS exhibit a large natural variation with up to 2173 polymorphic sites in mitogenomes, whereas CLS display 92 sites. Moreover, while CLS have two Prdm9 alleles, WDS harbour 46 different alleles. Although CLS resemble M. m. domesticus and M. m. musculus WDS, they differ from them in 10 and 14 out of 16 phenotypic traits, respectively. The results suggest that WDS can be a useful tool in evolutionary and biomedical studies with great potential for medical applications.

Indexed as

Genetic VariationMiceAllelesAnimalsAnimals, WildDNA Copy Number VariationsDNA, MitochondrialFemaleHistone-Lysine N-MethyltransferaseMalePhenotypeSpecies SpecificityDNA, MitochondrialHistone-Lysine N-Methyltransferaseprdm9 protein, mouse

Identifiers

PMID40199997
PMCPMC11978780

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.