Evidence map›Paper›PMID 40199855›Full record

ArticleNature communications2025

PACT prevents aberrant activation of PKR by endogenous dsRNA without sequestration.

Sadeem Ahmad, Tao Zou, Jihee Hwang, Linlin Zhao, Xi Wang, Anton Davydenko, Ilana Buchumenski, Patrick Zhuang, Alyssa R Fishbein, Diego Capcha-Rodriguez and 6 more

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

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  17. RNA triggers chronic stress during neuronal aging.bioRxiv : the preprint server for biology · 2025
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Sadeem Ahmad *Howard Hughes Medical Institute and Program in Cellular and Molecular Medicine, Boston Children's Hospital, Boston, MA, USA.
Tao Zou *Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Jihee Hwang *Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA, USA.
Linlin Zhao *Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA, USA.ORCID http://orcid.org/0000-0002-2228-6877
Xi WangHoward Hughes Medical Institute and Program in Cellular and Molecular Medicine, Boston Children's Hospital, Boston, MA, USA.
Anton DavydenkoHoward Hughes Medical Institute and Program in Cellular and Molecular Medicine, Boston Children's Hospital, Boston, MA, USA.
Ilana BuchumenskiMina and Everard Goodman Faculty of Life Sciences, Bar-Ilan University, Ramat Gan, Israel.
Patrick ZhuangDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Alyssa R FishbeinDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Diego Capcha-RodriguezDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.ORCID http://orcid.org/0009-0009-2520-6105
Aaron OrgelDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Erez Y LevanonMina and Everard Goodman Faculty of Life Sciences, Bar-Ilan University, Ramat Gan, Israel.ORCID http://orcid.org/0000-0002-3641-4198
Sua MyongDepartment of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA, USA.ORCID http://orcid.org/0000-0001-9098-3423
James ChouDepartment of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA, USA. james_chou@mail.sioc.ac.cn.ORCID http://orcid.org/0000-0002-4442-0344
Matthew MeyersonDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA. matthew_meyerson@dfci.harvard.edu.ORCID http://orcid.org/0000-0002-9133-8108
Sun HurHoward Hughes Medical Institute and Program in Cellular and Molecular Medicine, Boston Children's Hospital, Boston, MA, USA. sun.hur@crystal.harvard.edu.ORCID http://orcid.org/0000-0001-5005-5550

Funding

Physician Scientist Training in Cancer ResearchT32CA009172 · NCI · DANA-FARBER CANCER INSTITUTE · PI Jennifer R Brown, James A. DeCaprio · 1985 to 2026
$17.1M
NKX2-1 Enhancer Amplification and Lineage Addiction in Lung AdenocarcinomaR35CA197568 · NCI · DANA-FARBER CANCER INST · PI Matthew L. Meyerson · 2015 to 2026
$12.4M
Structural and functional analyses of the RIG-I filament in innate immunityR01AI111784 · NIAID · BOSTON CHILDREN'S HOSPITAL · PI HUR, SUN · 2014 to 2023
$4.9M
Molecular mechanisms for antiviral signaling and regulation by MDA5 and TRIM65R01AI154653 · NIAID · BOSTON CHILDREN'S HOSPITAL · PI HUR, SUN · 2020 to 2024
$2.2M
NCI NIH HHS R35 CA197568NCI NIH HHS T32 CA009172NIAID NIH HHS R01 AI111784NIAID NIH HHS R01 AI154653
6 · The paper itself

Abstract

The innate immune sensor PKR for double-stranded RNA (dsRNA) is critical for antiviral defense, but its aberrant activation by cellular dsRNA is linked to various diseases. The dsRNA-binding protein PACT plays a critical yet controversial role in this pathway. We show that PACT directly suppresses PKR activation by endogenous dsRNA ligands, such as inverted-repeat Alu RNAs, which robustly activate PKR in the absence of PACT. Instead of competing for dsRNA binding, PACT prevents PKR from scanning along dsRNA-a necessary step for PKR molecules to encounter and phosphorylate each other for activation. While PKR favors longer dsRNA for increased co-occupancy and scanning-mediated activation, longer dsRNA is also more susceptible to PACT-mediated regulation due to increased PACT-PKR co-occupancy. Unlike viral inhibitors that constitutively suppress PKR, this RNA-dependent mechanism allows PACT to fine-tune PKR activation based on dsRNA length and quantity, ensuring self-tolerance without sequestering most cellular dsRNA.

Indexed as

eIF-2 KinaseRNA-Binding ProteinsRNA, Double-StrandedAlu ElementsAnimalsEnzyme ActivationHEK293 CellsHumansPhosphorylationEIF2AK2 protein, humaneIF-2 KinaseRNA-Binding ProteinsRNA, Double-Stranded

Identifiers

PMID40199855
PMCPMC11978871

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.