Evidence map›Paper›PMID 40196107›Full record

ArticleFrontiers in immunology2025

Integrated bioinformatics analysis and biological experiments to identify key immune genes in vascular dementia.

Yilong Zhao, Wen Xing, Weiqi Chen, Yilong Wang

Abstract read
In one paragraph

Article in Frontiers in immunology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Yilong ZhaoDepartment of Neurology, Beijing Tiantan Hospital, Capital Medical University, Beijing, China.
Wen XingDepartment of Clinical Laboratory, Beijing Bo'ai Hospital, China Rehabilitation Research Center, Beijing, China.
Weiqi ChenDepartment of Neurology, Beijing Tiantan Hospital, Capital Medical University, Beijing, China.
Yilong WangDepartment of Neurology, Beijing Tiantan Hospital, Capital Medical University, Beijing, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Objectives: This study aimed to identify key immune genes to provide new perspectives on the mechanisms and diagnosis of vascular dementia (VaD) based on bioinformatic methods combined with biological experiments in mice. Methods: We obtained gene expression profiles from a Gene Expression Omnibus database (GSE186798). The gene expression data were analysed using integrated bioinformatics and machine learning techniques to pinpoint potential key immune-related genes for diagnosing VaD. Moreover, the diagnostic accuracy was evaluated through receiver operating characteristic curve analysis. The microRNA, transcription factor (TF), and drug-regulating hub genes were predicted using the database. Immune cell infiltration has been studied to investigate the dysregulation of immune cells in patients with VaD. To evaluate cognitive impairment, mice with bilateral common carotid artery stenosis (BCAS) were subjected to behavioural tests 30 d after chronic cerebral hypoperfusion. The expression of hub genes in the BCAS mice was determined using a quantitative polymerase chain reaction(qPCR). Results: The results of gene set enrichment and gene set variation analyses indicated that immune-related pathways were upregulated in patients with VaD. A total of 1620 immune genes were included in the combined immune dataset, and 323 differentially expressed genes were examined using the GSE186798 dataset. Thirteen potential genes were identified using differential gene analysis. Protein-protein interaction network design and functional enrichment analysis were performed using the immune system as the main subject. To evaluate the diagnostic value, two potential core genes were selected using machine learning. Two putative hub genes, Rac family small GTPase 1( Conclusions:

Indexed as

Computational BiologyDementia, VascularAnimalsDatabases, GeneticDisease Models, AnimalGene Expression ProfilingGene Expression RegulationGene Regulatory NetworksHumansMachine LearningMaleMiceMicroRNAsProtein Interaction Mapsrac1 GTP-Binding ProteinTranscriptomeMicroRNAsrac1 GTP-Binding ProteinbioinformaticsCMTM5machine learningRAC1vascular dementia

Identifiers

PMID40196107
PMCPMC11973090

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.