Evidence map›Paper›PMID 40195305›Full record

ArticleNature communications2025

Far-red fluorescent genetically encoded calcium ion indicators.

Rochelin Dalangin, Bill Z Jia, Yitong Qi, Abhi Aggarwal, Kenryo Sakoi, Mikhail Drobizhev, Rosana S Molina, Ronak Patel, Ahmed S Abdelfattah, Jihong Zheng and 15 more

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed.

  1. Review
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  15. Article
  16. Article
  17. Luminos: open-source software for bidirectional microscopy.bioRxiv : the preprint server for biology · 2025
    Article
  18. All-optical mapping of CaCell calcium · 2025
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors.

Rochelin DalanginDepartment of Chemistry, University of Alberta, Edmonton, AB, Canada.
Bill Z JiaDepartment of Chemistry and Chemical Biology, Harvard University, Cambridge, MA, USA.ORCID http://orcid.org/0000-0002-1138-3217
Yitong QiDepartment of Chemistry and Chemical Biology, Harvard University, Cambridge, MA, USA.
Abhi AggarwalJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.ORCID http://orcid.org/0000-0002-6336-566X
Kenryo SakoiDepartment of Chemistry, The University of Tokyo, Tokyo, Japan.
Mikhail DrobizhevDepartment of Cell Biology & Neuroscience, Montana State University, Bozeman, MT, USA.ORCID http://orcid.org/0000-0001-9072-1300
Rosana S MolinaDepartment of Cell Biology & Neuroscience, Montana State University, Bozeman, MT, USA.ORCID http://orcid.org/0000-0001-7891-2462
Ronak PatelJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.
Ahmed S AbdelfattahJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.ORCID http://orcid.org/0000-0001-8131-1772
Jihong ZhengJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.ORCID http://orcid.org/0000-0002-1247-6087
Daniel ReepJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.ORCID http://orcid.org/0009-0009-7638-9538
Jeremy P HassemanJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.ORCID http://orcid.org/0000-0002-0096-7321
GENIE Project Team
Yufeng ZhaoDepartment of Chemistry, University of Alberta, Edmonton, AB, Canada.
Jiahui WuDepartment of Chemistry, University of Alberta, Edmonton, AB, Canada.ORCID http://orcid.org/0000-0003-2406-6728
Kaspar PodgorskiJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.ORCID http://orcid.org/0000-0002-0374-2005
Alison G TeboJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.ORCID http://orcid.org/0000-0003-0788-5617
Eric R SchreiterJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.ORCID http://orcid.org/0000-0002-2864-7469
Thomas E HughesDepartment of Cell Biology & Neuroscience, Montana State University, Bozeman, MT, USA.ORCID http://orcid.org/0000-0002-8430-070X
Takuya TeraiDepartment of Chemistry, The University of Tokyo, Tokyo, Japan.ORCID http://orcid.org/0000-0002-3425-3589
Marie-Eve PaquetCentre de recherche CERVO, Québec, QC, Canada.
Sean G MegasonDepartment of Systems Biology, Harvard Medical School, Boston, MA, USA.ORCID http://orcid.org/0000-0002-9330-2934
Adam E CohenDepartment of Chemistry and Chemical Biology, Harvard University, Cambridge, MA, USA.ORCID http://orcid.org/0000-0002-8699-2404
Yi ShenDepartment of Chemistry, University of Alberta, Edmonton, AB, Canada. yi.shen@ualberta.ca.ORCID http://orcid.org/0000-0003-4117-0279
Robert E CampbellDepartment of Chemistry, University of Alberta, Edmonton, AB, Canada. campbell@chem.s.u-tokyo.ac.jp.ORCID http://orcid.org/0000-0003-0604-092X

Funding

High-Resolution Bidirectional Optical-Acoustic Mesoscopic Neural Interface for Image-Guided Neuromodulation in Behaving Animals - RF1 Admin SupplementRF1NS126102 · NINDS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI CAMPBELL, ROBERT E., RAZANSKY, DANIEL · 2022 to 2024
$3.1M
Resource for Multiphoton Characterization of Genetically-Encoded ProbesU24NS109107 · NINDS · MONTANA STATE UNIVERSITY - BOZEMAN · PI Mikhail Drobizhev · 2018 to 2026
$2.2M
Two-Photon All-Optical Electrophysiology in Behaving MiceRF1NS126043 · NINDS · HARVARD UNIVERSITY · PI COHEN, ADAM EZRA · 2022 to 2022
$2.2M
Chemigenetic voltage indicators for far-red and two-photon imaging in vivoRF1NS133755 · NINDS · BROWN UNIVERSITY · PI ABDELFATTAH, AHMED · 2023 to 2023
$2.2M
Gouvernement du Canada | Canadian Institutes of Health Research (Instituts de Recherche en Santé du Canada) FS 154310Gouvernement du Canada | Natural Sciences and Engineering Research Council of Canada (Conseil de Recherches en Sciences Naturelles et en Génie du Canada) RGPIN 2018 04364MEXT | Japan Society for the Promotion of Science (JSPS) 19H05633 and 24H00489NINDS NIH HHS RF1 NS126043NINDS NIH HHS RF1 NS126102NINDS NIH HHS RF1 NS133755NINDS NIH HHS U24 NS109107U.S. Department of Health & Human Services | National Institutes of Health (NIH) 1R01NS126102-01U.S. Department of Health & Human Services | National Institutes of Health (NIH) 1R01NS133755 and 1R01NS126043U.S. Department of Health & Human Services | National Institutes of Health (NIH) U24NS109107
6 · The paper itself

Abstract

Genetically encoded calcium ion (Ca

Indexed as

CalciumLuminescent ProteinsAction PotentialsAnimalsFluorescent DyesHEK293 CellsHumansMiceNeuronsOptogeneticsRed Fluorescent ProteinCalciumFluorescent DyesLuminescent ProteinsRed Fluorescent Protein

Identifiers

PMID40195305
PMCPMC11977202

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.