Evidence map›Paper›PMID 40193347›Full record

ArticlePLoS genetics2025

Conserved chromatin regulators control the transcriptional immune response to intracellular pathogens in Caenorhabditis elegans.

Eillen Tecle, Paaramitha Warushavithana, Samuel Li, Michael J Blanchard, Crystal B Chhan, Theresa Bui, Ryan S Underwood, Malina A Bakowski, Emily R Troemel, Vladimir Lažetić

Abstract read
In one paragraph

Article in PLoS genetics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Eillen TecleDepartment of Cell and Developmental Biology, School of Biological Sciences, University of California, San Diego, La Jolla, California, United States of America.ORCID https://orcid.org/0000-0003-4253-1128
Paaramitha WarushavithanaDepartment of Biological Sciences, Columbian College of Arts and Sciences, The George Washington University, District of Columbia,Washington, United States of America.ORCID https://orcid.org/0009-0009-3040-5125
Samuel LiDepartment of Biological Sciences, Columbian College of Arts and Sciences, The George Washington University, District of Columbia,Washington, United States of America.ORCID https://orcid.org/0009-0003-5959-1159
Michael J BlanchardDepartment of Cell and Developmental Biology, School of Biological Sciences, University of California, San Diego, La Jolla, California, United States of America.ORCID https://orcid.org/0000-0002-2902-6154
Crystal B ChhanDepartment of Cell and Developmental Biology, School of Biological Sciences, University of California, San Diego, La Jolla, California, United States of America.ORCID https://orcid.org/0000-0002-1394-783X
Theresa BuiDepartment of Cell and Developmental Biology, School of Biological Sciences, University of California, San Diego, La Jolla, California, United States of America.ORCID https://orcid.org/0000-0002-5986-9996
Ryan S UnderwoodDepartment of Cell and Developmental Biology, School of Biological Sciences, University of California, San Diego, La Jolla, California, United States of America.
Malina A BakowskiDepartment of Cell and Developmental Biology, School of Biological Sciences, University of California, San Diego, La Jolla, California, United States of America.
Emily R TroemelDepartment of Cell and Developmental Biology, School of Biological Sciences, University of California, San Diego, La Jolla, California, United States of America.ORCID https://orcid.org/0000-0003-2422-0473
Vladimir LažetićDepartment of Cell and Developmental Biology, School of Biological Sciences, University of California, San Diego, La Jolla, California, United States of America.ORCID https://orcid.org/0000-0001-5825-6584

Funding

The Intracellular Pathogen Response Triggers Defense Against Co-evolved PathogensR01GM114139 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Emily R Troemel · 2015 to 2026
$3.1M
Probing organismal proteostasis through the response to intracellular infectionR01AG052622 · NIA · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Emily R Troemel · 2017 to 2026
$2.7M
Innate immunity against viral infection in intestinal epithelial cells of C. elegansR01AI176639 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Emily R Troemel · 2023 to 2026
$1.5M
NIAID NIH HHS R01 AI176639NIA NIH HHS R01 AG052622NIGMS NIH HHS R01 GM114139
6 · The paper itself

Abstract

Robust transcriptional responses are critical for defense against infection. However, unrestrained immune responses can cause negative impacts such as damaging inflammation and slowed development. Here, we find that a class of transcriptional regulators previously associated with regulation of development in Caenorhabditis elegans, is also involved in repressing immune responses. Specifically, through forward genetics, we find that loss of lin-15B leads to constitutive expression of Intracellular Pathogen Response (IPR) genes. lin-15B encodes a transcriptional repressor with a conserved THAP domain that is associated with the DRM chromatin remodeling complex that regulates C. elegans development. We show that lin-15B mutants have increased resistance to natural intracellular pathogens, and the induction of IPR genes in lin-15B mutants relies on the MES-4 histone methyltransferase. We extend our analyses to other DRM and NuRD chromatin remodeling factors, as well as SUMOylation histone modifiers, showing that a broad range of chromatin-related factors can repress IPR gene expression. Altogether these findings suggest that conserved chromatin regulators may facilitate development in part by repressing damaging immune responses against intracellular pathogens.

Indexed as

Caenorhabditis elegansCaenorhabditis elegans ProteinsChromatinAnimalsChromatin Assembly and DisassemblyGene Expression RegulationImmunity, InnateMutationRepressor ProteinsTranscription FactorsCaenorhabditis elegans ProteinsChromatinRepressor ProteinsTranscription Factors

Identifiers

PMID40193347
PMCPMC11975079

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.