Evidence map›Paper›PMID 40193195›Full record

ArticleeLife2025

N6-methyladenosine in DNA promotes genome stability.

Brooke A Conti, Leo Novikov, Deyan Tong, Qing Xiang, Savon Vigil, Thomas J McLellan, Chuong Nguyen, Nancy De La Cruz, Reshma T Veettil, Prashant Pradhan and 6 more

Abstract read
In one paragraph

Article in eLife, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Unscheduled mInternational journal of molecular sciences · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Brooke A ContiCenters for Therapeutic Innovation, Emerging Sciences and Innovation, Pfizer, New York, United States.ORCID https://orcid.org/0000-0002-0320-0732
Leo NovikovCenters for Therapeutic Innovation, Emerging Sciences and Innovation, Pfizer, New York, United States.
Deyan TongTarget Sciences, Emerging Sciences and Innovation, Pfizer, New York, United States.
Qing XiangTarget Sciences, Emerging Sciences and Innovation, Pfizer, New York, United States.
Savon VigilDiscovery Sciences, Pfizer, Groton, United States.
Thomas J McLellanDiscovery Sciences, Pfizer, Groton, United States.
Chuong NguyenDiscovery Sciences, Pfizer, Groton, United States.
Nancy De La CruzLaboratory of Nuclear Organization, Cecil H. and Ida Green Center for Reproductive Biology Sciences, Division of Basic Research, Department of Obstetrics and Gynecology, Department of Molecular Biology, Hamon Center for Regenerative Science and Medicine, University of Texas Southwestern Medical Center, Dallas, United States.
Reshma T VeettilLaboratory of Nuclear Organization, Cecil H. and Ida Green Center for Reproductive Biology Sciences, Division of Basic Research, Department of Obstetrics and Gynecology, Department of Molecular Biology, Hamon Center for Regenerative Science and Medicine, University of Texas Southwestern Medical Center, Dallas, United States.
Prashant PradhanLaboratory of Nuclear Organization, Cecil H. and Ida Green Center for Reproductive Biology Sciences, Division of Basic Research, Department of Obstetrics and Gynecology, Department of Molecular Biology, Hamon Center for Regenerative Science and Medicine, University of Texas Southwestern Medical Center, Dallas, United States.
Parag SahasrabudheDiscovery Sciences, Pfizer, Groton, United States.
Jason D ArroyoTarget Sciences, Emerging Sciences and Innovation, Pfizer, Cambridge, United States.
Lei ShangTarget Sciences, Emerging Sciences and Innovation, Pfizer, Cambridge, United States.
Benjamin R SabariLaboratory of Nuclear Organization, Cecil H. and Ida Green Center for Reproductive Biology Sciences, Division of Basic Research, Department of Obstetrics and Gynecology, Department of Molecular Biology, Hamon Center for Regenerative Science and Medicine, University of Texas Southwestern Medical Center, Dallas, United States.
David J ShieldsCenters for Therapeutic Innovation, Emerging Sciences and Innovation, Pfizer, New York, United States.
Mariano OppikoferCenters for Therapeutic Innovation, Emerging Sciences and Innovation, Pfizer, New York, United States.ORCID https://orcid.org/0000-0001-8579-0475

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNA base lesions, such as incorporation of uracil into DNA or base mismatches, can be mutagenic and toxic to replicating cells. To discover factors in repair of genomic uracil, we performed a CRISPR knockout screen in the presence of floxuridine, a chemotherapeutic agent that incorporates uracil and fluorouracil into DNA. We identified known factors, such as uracil DNA N-glycosylase (UNG), and unknown factors, such as the N6-adenosine methyltransferase, METTL3, as required to overcome floxuridine-driven cytotoxicity. Visualized with immunofluorescence, the product of METTL3 activity, N6-methyladenosine, formed nuclear foci in cells treated with floxuridine. The observed N6-methyladenosine was embedded in DNA, called 6mA, and these results were confirmed using an orthogonal approach, liquid chromatography coupled to tandem mass spectrometry. METTL3 and 6mA were required for repair of lesions driven by additional base-damaging agents, including raltitrexed, gemcitabine, and hydroxyurea. Our results establish a role for METTL3 and 6mA in promoting genome stability in mammalian cells, especially in response to base damage.

Indexed as

AdenosineDNAGenomic InstabilityDNA DamageDNA RepairHumansMethyltransferasesAdenosineDNAMethyltransferasesMETTL3 protein, humanN-methyladenosine6mAcancer biologycell biologyhumanMETTL3MMRN6-methyladenosineU-BERUNG

Identifiers

PMID40193195
PMCPMC11975372

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.