Evidence map›Paper›PMID 40188150›Full record

ArticleNature communications2025

Multi-proton dynamics near membrane-water interface.

Subhasish Mallick, Noam Agmon

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Proton wave propagation along collagen fibers.European biophysics journal : EBJ · 2026
    Article
  3. Glycolipids slow interfacial proton migration while preserving surface proton retention.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  4. Quinones operate as proton-collecting antennas in energy-transducing membranes.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  5. Review
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Subhasish MallickThe Fritz Haber Research Center, Institute of Chemistry, The Hebrew University of Jerusalem, Jerusalem, Israel.ORCID http://orcid.org/0000-0001-5990-8927
Noam AgmonThe Fritz Haber Research Center, Institute of Chemistry, The Hebrew University of Jerusalem, Jerusalem, Israel. agmon@fh.huji.ac.il.ORCID http://orcid.org/0000-0003-4339-8664

Funding

Israel Science Foundation (ISF) 722/19 and 817/24
6 · The paper itself

Abstract

Protons are crucial for biological energy transduction between membrane proteins. While experiments suggest rapid proton motion over large distances at the membrane-water interface, computational studies employing a single excess proton found the proton immobilized near the lipid headgroup. To address this discrepancy, we conduct DFTB3 simulations by incrementally adding protons up to three. We show that a single proton moves rapidly toward the nearest headgroup, where it is either repelled by a choline group or binds covalently to phosphatic oxygen. With multiple protons, while some are trapped by the lipid headgroups, the remaining proton diffuses laterally faster than in bulk water. Driven by excess energy, this proton initially jumps to the center of the water slab before relaxing into the third- and second-hydration shells. Lateral diffusion rates increase as the proton stabilizes in the second hydration shell. These results provide insights into proton dynamics near membranes and explain experimental observations.

Identifiers

PMID40188150
PMCPMC11972326

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.