Evidence map›Paper›PMID 40186116›Full record

ArticleBMC microbiology2025

Multilocus sequence typing of clinical and colonizing isolates of Acinetobacter baumannii and comparison with the world isolates.

Jyoti Choudhary, Malini Shariff

Abstract readComparative Study
In one paragraph

Article in BMC microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Comparative genomic analysis ofJAC-antimicrobial resistance · 2026
    Article
  3. Genomic Epidemiology of Carbapenem-ResistantAntibiotics (Basel, Switzerland) · 2026
    Article
  4. Resistome, virulome and genomic insights into the silent dissemination ofFrontiers in cellular and infection microbiology · 2026
    Article
  5. Review
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Jyoti ChoudharyDepartment of Microbiology, Vallabhbhai Patel Chest Institute, University of Delhi, Delhi, 110007, India.
Malini ShariffDepartment of Microbiology, Vallabhbhai Patel Chest Institute, University of Delhi, Delhi, 110007, India. malini.shariff@gmail.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectivesTo establish the epidemiological correlation between the study isolates, Indian and World isolates of Acinetobacter baumannii by performing Multilocus Sequence typing. MATERIALS AND

methodsA total of 181 isolates (Sputum (n = 116), lower respiratory tract other than sputum (n = 36), upper respiratory tract (n = 20), Environment (medical) (n = 4), and Blood (n = 5) of Acinetobacter baumannii were retrieved from our repository. DNA was isolated and Multilocus Sequence Typing was performed according to the Pasteur scheme. The amplified fragments were sequenced by outsourcing, and the locus and the sequence types were determined as given in the PUBMLST site. The clonal complexes were assigned using eBURST. RESULTS AND

conclusionOf the 181 isolates, 20 were colonizers and 4 were from hospital environments. All the study isolates were multidrug-resistant (MDR) and 4 of them were extensively drug-resistant (XDR). 23 sequence types were unique and were assigned new sequence types. Among them, 2125 (n = 12), an SLV (Single Locus Variant) of 2, was the commonest followed by 2126 (n = 2) which was a DLV (Double Locus Variant) of 2 and an SLV of 2125. Others were singletons. Among the known STs, 149 (n = 72) was the commonest followed by ST 2 (n = 62) & 415 (n = 5), ST 10 (n = 4), ST 15, ST622 and ST1482 (3 each). ST149 had 1SLV ST1482 (n = 3). ST 2 has 5 SLVs (415, 1555, 2125, 2128, & 2131, and 2 DLVs (2130 & 2126). eBURST analysis of the study isolates showed three groups: Group I (86 isolates) with ST 2 as the primary founder, group II (6 isolates) and group III (79 isolates) with ST 149 as the primary founder. All the other 11 isolates were singletons. There was no difference in antimicrobial sensitivity or sequence types of clinical and colonizing isolates. The sequence types of study isolates were compared to the world isolates in the PUBMLST database. To conclude, MLST is an important tool for establishing isolates' phylogenetic relationships. Acinetobacter baumannii being an important nosocomial pathogen should be routinely screened for the frequent changes in the sequence types to demonstrate the emerging resistance patterns and other changes.

Indexed as

Acinetobacter baumanniiAcinetobacter InfectionsMultilocus Sequence TypingAnti-Bacterial AgentsDNA, BacterialDrug Resistance, Multiple, BacterialGenotypeHumansIndiaMicrobial Sensitivity TestsMolecular EpidemiologySputumAnti-Bacterial AgentsDNA, BacterialAcinetobacter baumannii; Multilocus sequence typingBurst analysisWorld isolates

Identifiers

PMID40186116
PMCPMC11969935

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