Evidence map›Paper›PMID 40185856›Full record

ArticleScientific reports2025

A high-throughput, fully automated competition assay to evaluate SARS-CoV-2 neutralizing responses and epitope specificity in clinical samples.

Yusuke Atarashi, Jeeeun Kim, Yasuhiro Irino, Masayuki Amano, Kiyoto Tsuchiya, Kenji Maeda, Mari Terada, Noriko Iwamoto, Shinya Shimada, Hiroaki Mitsuya and 2 more

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Yusuke AtarashiCentral Research Laboratories, Sysmex Corporation, Kobe, 651-2271, Japan.
Jeeeun KimCentral Research Laboratories, Sysmex Corporation, Kobe, 651-2271, Japan.
Yasuhiro IrinoCentral Research Laboratories, Sysmex Corporation, Kobe, 651-2271, Japan.
Masayuki AmanoDepartment of Clinical Retrovirology, Joint Research Center for Human Retrovirus Infection, Kumamoto University, Kumamoto, 860-8556, Japan.
Kiyoto TsuchiyaAIDS Clinical Center, Center hospital of the National Center for Global Health and Medicine, Tokyo, 162-8655, Japan.
Kenji MaedaRefractory Viral Diseases, National Center for Global Health and Medicine Research Institute, Tokyo, 162-8655, Japan.
Mari TeradaDepartment of Disease Control Center, Center Hospital of the National Center for Global Health and Medicine, Tokyo, 162-8655, Japan.
Noriko IwamotoDepartment of Disease Control Center, Center Hospital of the National Center for Global Health and Medicine, Tokyo, 162-8655, Japan.
Shinya ShimadaJapan Community Healthcare Organization, Kumamoto General Hospital, 866- 8660, Kumamoto, Japan.
Hiroaki MitsuyaRefractory Viral Diseases, National Center for Global Health and Medicine Research Institute, Tokyo, 162-8655, Japan.
Masatoshi YanagidaCentral Research Laboratories, Sysmex Corporation, Kobe, 651-2271, Japan.
Yuki TakamatsuRefractory Viral Diseases, National Center for Global Health and Medicine Research Institute, Tokyo, 162-8655, Japan. ytakamatsu@ri.ncgm.go.jp.

Funding

Intramural Research Program of the National Center for Global Health and Medicine 19A3001Japan Agency for Medical Research and Development JP20fk0108502
6 · The paper itself

Abstract

Coronavirus disease-2019 (COVID-19) remains a critical global health concern. We developed a fully automated, high-throughput competition immunoassay to elucidate how epitope recognition on the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) spike receptor-binding domain (RBD) correlates with neutralizing activity. Analysis of clinical samples from both SARS-CoV-2-infected and vaccinated individuals revealed that vaccination elicits significantly higher antibody titers across multiple S1 subunit epitopes compared to natural infection. Notably, median antibody levels against the receptor-binding motif (RBM) exceeded 50% in both cohorts, highlighting the RBM as a key target for antibody induction irrespective of immune origin. Furthermore, the strongest correlation with neutralizing activity was observed for antibodies directed against the broader S1 subunit, indicating that epitopes outside the RBM also contribute to neutralization. These findings underscore the importance of both RBM- and non-RBM-directed antibodies in effective immune defense against SARS-CoV-2. Our assay enables large-scale, reliable quantification of neutralizing antibodies and provides critical insights for developing improved diagnostic antigens and vaccine strategies aimed at eliciting robust, multi-epitope immune responses.

Indexed as

Antibodies, NeutralizingAntibodies, ViralCOVID-19EpitopesSARS-CoV-2Spike Glycoprotein, CoronavirusCOVID-19 VaccinesFemaleHigh-Throughput Screening AssaysHumansAntibodies, NeutralizingAntibodies, ViralCOVID-19 VaccinesEpitopesSpike Glycoprotein, Coronavirusspike protein, SARS-CoV-2Antibody testHigh throughput testingNeutralizing activitySARS-CoV-2

Identifiers

PMID40185856
PMCPMC11971398

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.