Evidence map›Paper›PMID 40185749›Full record

ArticleNature communications2025

Cooperative role of PACT and ADAR1 in preventing aberrant PKR activation by self-derived double-stranded RNA.

Lavanya Manjunath, Gisselle Santiago, Pedro Ortega, Ambrocio Sanchez, Sunwoo Oh, Alexander Garcia, Junyi Li, Dana Duong, Elodie Bournique, Alexis Bouin and 3 more

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

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  15. The role of ADAR1 in human pathophysiology.Frontiers in cell and developmental biology · 2025
    Review
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  17. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors.

Lavanya ManjunathDepartment of Biological Chemistry, School of Medicine, University of California Irvine, Irvine, California, USA.ORCID http://orcid.org/0000-0003-1898-3570
Gisselle SantiagoDepartment of Biological Chemistry, School of Medicine, University of California Irvine, Irvine, California, USA.
Pedro OrtegaDepartment of Biological Chemistry, School of Medicine, University of California Irvine, Irvine, California, USA.ORCID http://orcid.org/0000-0003-4216-3695
Ambrocio SanchezDepartment of Biological Chemistry, School of Medicine, University of California Irvine, Irvine, California, USA.ORCID http://orcid.org/0000-0003-1462-1767
Sunwoo OhDepartment of Biological Chemistry, School of Medicine, University of California Irvine, Irvine, California, USA.ORCID http://orcid.org/0000-0001-9205-4660
Alexander GarciaDepartment of Biological Chemistry, School of Medicine, University of California Irvine, Irvine, California, USA.
Junyi LiDepartment of Biological Chemistry, School of Medicine, University of California Irvine, Irvine, California, USA.ORCID http://orcid.org/0009-0002-0982-1377
Dana DuongDepartment of Biological Chemistry, School of Medicine, University of California Irvine, Irvine, California, USA.ORCID http://orcid.org/0009-0001-0136-5314
Elodie BourniqueDepartment of Biological Chemistry, School of Medicine, University of California Irvine, Irvine, California, USA.ORCID http://orcid.org/0000-0003-0196-7996
Alexis BouinCenter for Virus Research, University of California Irvine, Irvine, California, USA.
Bert L SemlerCenter for Virus Research, University of California Irvine, Irvine, California, USA.ORCID http://orcid.org/0000-0002-2424-5155
Dheva SetiaputraDepartment of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, British Columbia, Canada.ORCID http://orcid.org/0000-0003-2956-6422
Rémi BuissonDepartment of Biological Chemistry, School of Medicine, University of California Irvine, Irvine, California, USA. rbuisson@uci.edu.ORCID http://orcid.org/0000-0002-7196-8209

Funding

Univ.of Calif., Irvine Cancer Center Support GrantP30CA062203 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI Melanie Funes · 1994 to 2026
$57.9M
Molecular Mechanisms of APOBEC-Induced Mutagenesis in CancerR37CA252081 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI Remi Buisson · 2021 to 2026
$2.5M
Nuclear functions co-opted by human rhinovirus during replication in the cytoplasm of infected cellsR01AI155962 · NIAID · UNIVERSITY OF CALIFORNIA-IRVINE · PI GERSHON, PAUL D, SEMLER, BERT L · 2021 to 2025
$2.3M
NF-KB regulation by the DNA damage responseR21ES036190 · NIEHS · UNIVERSITY OF CALIFORNIA-IRVINE · PI BUISSON, REMI · 2025 to 2025
$432k
Role of APOBEC3B in the Innate Immune ResponseR21AI185033 · NIAID · UNIVERSITY OF CALIFORNIA-IRVINE · PI Remi Buisson · 2025 to 2026
$425k
American Cancer Society (American Cancer Society, Inc.) RSG-24-1249960-01-DMCNCI NIH HHS P30 CA062203NCI NIH HHS R37 CA252081NIAID NIH HHS R01 AI155962NIAID NIH HHS R21 AI185033NIEHS NIH HHS R21 ES036190
6 · The paper itself

Abstract

Double-stranded RNAs (dsRNAs) produced during viral infections are recognized by the innate immune sensor protein kinase R (PKR), triggering a host translation shutoff that inhibits viral replication and propagation. Given the harmful effects of uncontrolled PKR activation, cells must tightly regulate PKR to ensure that its activation occurs only in response to viral infections, not endogenous dsRNAs. Here, we use CRISPR-Translate, a FACS-based genome-wide CRISPR-Cas9 knockout screening method that exploits translation levels as a readout and identifies PACT as a key inhibitor of PKR during viral infection. We find that PACT-deficient cells hyperactivate PKR in response to different RNA viruses, raising the question of why cells need to limit PKR activity. Our results demonstrate that PACT cooperates with ADAR1 to suppress PKR activation from self-dsRNAs in uninfected cells. The simultaneous deletion of PACT and ADAR1 results in synthetic lethality, which can be fully rescued in PKR-deficient cells. We propose that both PACT and ADAR1 act as essential barriers against PKR, creating a threshold of tolerable levels to endogenous dsRNA in cells without activating PKR-mediated translation shutdown and cell death.

Indexed as

Adenosine DeaminaseeIF-2 KinaseRNA-Binding ProteinsRNA, Double-StrandedAnimalsCRISPR-Cas SystemsEnzyme ActivationHEK293 CellsHumansMiceADAR protein, humanAdenosine DeaminaseEIF2AK2 protein, humaneIF-2 KinaseRNA-Binding ProteinsRNA, Double-Stranded

Identifiers

PMID40185749
PMCPMC11971382

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.