Evidence map›Paper›PMID 40185728›Full record

ArticleNature communications2025

Enzymatic Birch reduction via hydrogen atom transfer at [4Fe-4S]-OH

Jonathan Fuchs, Unai Fernández-Arévalo, Ulrike Demmer, Eduardo Díaz, G Matthias Ullmann, Antonio J Pierik, Ulrich Ermler, Matthias Boll

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Jonathan FuchsFaculty of Biology - Microbiology, University of Freiburg, 79104, Freiburg, Germany.ORCID http://orcid.org/0009-0002-5190-2488
Unai Fernández-ArévaloBiotechnology Department, Centro de Investigaciones Biológicas Margarita Salas-CSIC, 28040, Madrid, Spain.ORCID http://orcid.org/0009-0008-6292-0570
Ulrike DemmerDepartment of Molecular Membrane Biology, Max Planck Institute of Biophysics, 60438, Frankfurt am Main, Germany.
Eduardo DíazBiotechnology Department, Centro de Investigaciones Biológicas Margarita Salas-CSIC, 28040, Madrid, Spain.
G Matthias UllmannFaculty of Computational Biochemistry, University of Bayreuth, 95447, Bayreuth, Germany.ORCID http://orcid.org/0000-0002-6350-798X
Antonio J PierikDepartment of Chemistry, RPTU Kaiserslautern-Landau, 67663, Kaiserslautern, Germany.ORCID http://orcid.org/0000-0002-1509-6370
Ulrich ErmlerDepartment of Molecular Membrane Biology, Max Planck Institute of Biophysics, 60438, Frankfurt am Main, Germany.ORCID http://orcid.org/0000-0002-9583-1418
Matthias BollFaculty of Biology - Microbiology, University of Freiburg, 79104, Freiburg, Germany. matthias.boll@biologie.uni-freiburg.de.ORCID http://orcid.org/0000-0001-8062-8049

Funding

Deutsche Forschungsgemeinschaft (German Research Foundation) 235777276Deutsche Forschungsgemeinschaft (German Research Foundation) 311144407Deutsche Forschungsgemeinschaft (German Research Foundation) 444947649
6 · The paper itself

Abstract

The alkali metal- and ammonia-dependent Birch reduction is the classical synthetic method for achieving dihydro additions to arenes, typically yielding 1,4-cyclodienes. A mild biological alternative to this process are 1,5-dienoyl-coenzyme A (CoA)-forming class I and II benzoyl-CoA reductases (BCRs), widely abundant key enzymes in the biodegradation of aromatic compounds at anoxic environments. To obtain a comprehensive mechanistic understanding of class I BCR catalysis, we produced the active site subunits from a denitrifying bacterium and determined the X-ray structure of its substrate and product complexes at 1.4 Å revealing non-canonical double-cubane [8Fe-9S] and active site aqua-[4Fe-4S] clusters. Together with kinetic, spectroscopic and QM/MM studies, we provide evidence for a radical mechanism with a [4Fe-4S] cluster-bound water molecule acting as hydrogen atom and electron donor at potentials beyond the biological redox window. An analogous Birch-like radical mechanism is applied by class II BCRs with the catalytic water bound to a tungsten-bis-metallopterin cofactor. The use of activated, metal-bound water ligands as hydrogen atom donor serves as a basic blueprint for future enzymatic or biomimetic Birch reduction processes.

Indexed as

Bacterial ProteinsHydrogenIron-Sulfur ProteinsCatalytic DomainCrystallography, X-RayKineticsModels, MolecularOxidation-ReductionBacterial ProteinsHydrogenIron-Sulfur Proteins

Identifiers

PMID40185728
PMCPMC11971306

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.